Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5354 |
Symbol | |
ID | 1041982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 6104126 |
End bp | 6104533 |
Gene Length | 408 bp |
Protein Length | 135 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637148753 |
Product | hypothetical protein |
Protein accession | NP_747455 |
Protein GI | 26992030 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0206847 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.438372 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGAAGAAG TGATCGAACA ACTCCGTGAA GCGAATGAGC CGGTACCGGT GCCCCTGGAG CTTCCCGACG AAGACCAGCT GGTAGAAATC GAAGAGCAGC TGTTCATCAA TATTCCATTC GTGTTCAAAG AGTTTCTGCT GACCGTAAGT GATGTGGTTT ACGGCTCCCT TGAGCCAGTT ACCGTCACTG ATCCGCACTC GCACACCTAC CTGCCAGATG TGGCCTCCAA CGCTTGGGAT GCCGGCGTAC CGCGCGACCT GATTCCGCTG TGCCAGGACG GCGACAATTA CTATTGCGTG GAAGAAGACG GCACCGTGGT GCTGTGGGAT GCCGAAGAGG AAGGTGTCGG CGAAGACAGT TGGGAATCGG TGTGGCACTG GGCGCGAGAT GTTTGGCTGG AGAGCTGA
|
Protein sequence | MEEVIEQLRE ANEPVPVPLE LPDEDQLVEI EEQLFINIPF VFKEFLLTVS DVVYGSLEPV TVTDPHSHTY LPDVASNAWD AGVPRDLIPL CQDGDNYYCV EEDGTVVLWD AEEEGVGEDS WESVWHWARD VWLES
|
| |