| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5352 |
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| Symbol | uvrD |
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| ID | 1042103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 6100839 |
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| End bp | 6103025 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637148751 |
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| Product | DNA-dependent helicase II |
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| Protein accession | NP_747453 |
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| Protein GI | 26992028 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01075] DNA helicase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.138491 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCACAG ACGACCTCTC TCTCCTGCTG AATTCCCTCA ACGATGCCCA ACGCCAGGCC
GTAGCGGCCA CGCTCGGGCG TCAACTGGTG CTTGCCGGCG CCGGTTCCGG TAAAACCCGC
GTGCTGGTAC ACCGCATCGC CTGGCTGATC CAGGTCGAGC AGGCGTCGCC GCACTCGATC
CTGTCGGTGA CCTTCACCAA CAAGGCCGCA GCAGAAATGC GCCAGCGGAT CGAGCAACTG
CTGGGCATCA ACCCGGCAGG CATGTGGGTA GGCACCTTCC ACGGCCTGGC CCATCGCCTG
TTGCGGGCCC ACTGGCAGGA AGCGCGGCTG GTGCAGAACT TCCAGATCCT CGACAGCGAC
GACCAGCAGC GCCTGATCAA GCGGGTCATG CGCGAGTTGG GCCTGGACGA GCAGAAGTGG
CCGGCACGCC AGGCCCAATG GTTCATCAAC GGACAGAAAG ACGAAGGCCT GCGCCCGCAG
CATATCCAGG CGGGGGGCGA CCTGTTCCTG GCGACCATGC GCGAGGTCTA TACGGCCTAC
GAGCAGGCTT GCGAGCGCGC CGGTGTCATC GATTTCTCCG AGCTGCTGCT TCGCGCCCTG
GACCTGTGGC GTGACCACCC GGGCCTGCTG GAGCACTATC AGCGACGCTT CCGCCACGTG
CTGGTGGACG AGTTCCAGGA TACCAACGCC GTGCAGTACG CCTGGTTGCG CCTGCTGGCA
CGCGGTGGCG ACAGCCTGAT GGCGGTAGGC GATGACGACC AGTCGATCTA CGGCTGGCGC
GGCGCCAAGA TCGAGAACAT TCACCAGTAC ACCGCCGACT TCCCCGACGC CGAAATGATC
CGCCTGGAGC AGAACTACCG CTCCACCGGC GGCATCCTCA AGGCGGCCAA CGCGCTGATC
GCCAACAACA GCGGGCGCCT GGGCAAGGAA CTGTGGACCG ACATGGGCGA AGGCGAACCA
CTGACCCTGT ACGCGGCCTA CAACGAGCAC GACGAAGCGC GCTATGTCGT GGAAACCATC
GAGAGCCTGG TCAAGCAGGG CAATGCGCGC AACGAGATCG CCATCCTGTA CCGTTCCAAC
GCCCAGTCGC GCGTGCTGGA AGAGGCCCTG CTGCGCGAGC GCATCCCCTA CCGCATCTAT
GGCGGCCAGC GCTTCTTCGA GCGCGCCGAA ATCAAGAATG CCATGGCTTA CCTGCGCCTG
ATCGAAGGGC GTGGCAACGA TGCCGCTCTG GAGCGGGTGA TCAACGTGCC GCCGCGCGGT
ATTGGCGAAA AAACCGTCGA AGCCATCCGC GAGCACGCCC GCCACAGCCA GCTGTCCATG
TGGGAGGCCA TGTGCCAGCT GATCGCTGCC AAGGCCCTCA AAGGCCGCGC CGCCAGTGCC
CTGGGGGCCT TTATCGAGCT GATCGAGGGG CTGGCTGCCA AGGTTGTGGA CATGCCGCTG
CATACCATGA CCCAGACCAC CATCGAACAG TCCGGCCTGA TCACCTATCA CCAGGAAGAA
AAGGGTGAAA AGGGCCAGGC ACGGGTAGAA AACCTTGAGG AACTGGTCAG TGCGGCGCGC
AACTTCGAGT CCACCGACGA AGACGCCGAC CTTTCCCCGC TCTCGGCCTT CCTTGGCCAC
GCCTCACTCG AAGCTGGCGA TACTCAGGCT GACGAGCATG AAGACAGCAT CCAGCTGATG
ACCCTGCACA GCGCCAAAGG CCTTGAGTTC CCATATGTGT TCCTGGTGGG CATGGAAGAA
GGCTTGTTCC CGCACAAGAT GAGCCTGGAA GAACCCGGCC GCCTGGAAGA GGAACGACGC
CTGGCCTATG TAGGCATCAC CCGCGCCATG CGCCAGCTGG TCATGACCTA TGCCGAAACA
CGCCGCCTTT ATGGCAGCGA GACTTACAAC AAGGTGTCGC GTTTCGTACG TGAAATTCCG
GCAGGCCTGG TTCAGGAAGT ACGCCTGTCC AACAGCGTCA GCCGCCCGTT CGGCGGGGCC
AAGACGGCCA CCAACAGCAA CCTGTTCGCC AATGCCAGCA TTCCGCAGAC CGCGTTCAAC
CTTGGCCAGC GTGTGCAGCA TGCGGTATTC GGGGAAGGTG TGATCCTCAA CTTCGAGGGT
TCTGGCGCTC AGGCGCGGGT GCAGGTGAAT TTTGCCGAAG GTAGCAAATG GCTGATGCTG
GGGTATGCCA AGCTCGAGGC TGTCTAA
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| Protein sequence | MRTDDLSLLL NSLNDAQRQA VAATLGRQLV LAGAGSGKTR VLVHRIAWLI QVEQASPHSI
LSVTFTNKAA AEMRQRIEQL LGINPAGMWV GTFHGLAHRL LRAHWQEARL VQNFQILDSD
DQQRLIKRVM RELGLDEQKW PARQAQWFIN GQKDEGLRPQ HIQAGGDLFL ATMREVYTAY
EQACERAGVI DFSELLLRAL DLWRDHPGLL EHYQRRFRHV LVDEFQDTNA VQYAWLRLLA
RGGDSLMAVG DDDQSIYGWR GAKIENIHQY TADFPDAEMI RLEQNYRSTG GILKAANALI
ANNSGRLGKE LWTDMGEGEP LTLYAAYNEH DEARYVVETI ESLVKQGNAR NEIAILYRSN
AQSRVLEEAL LRERIPYRIY GGQRFFERAE IKNAMAYLRL IEGRGNDAAL ERVINVPPRG
IGEKTVEAIR EHARHSQLSM WEAMCQLIAA KALKGRAASA LGAFIELIEG LAAKVVDMPL
HTMTQTTIEQ SGLITYHQEE KGEKGQARVE NLEELVSAAR NFESTDEDAD LSPLSAFLGH
ASLEAGDTQA DEHEDSIQLM TLHSAKGLEF PYVFLVGMEE GLFPHKMSLE EPGRLEEERR
LAYVGITRAM RQLVMTYAET RRLYGSETYN KVSRFVREIP AGLVQEVRLS NSVSRPFGGA
KTATNSNLFA NASIPQTAFN LGQRVQHAVF GEGVILNFEG SGAQARVQVN FAEGSKWLML
GYAKLEAV
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