| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5339 |
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| Symbol | |
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| ID | 1042158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 6086469 |
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| End bp | 6087539 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637148738 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | NP_747440 |
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| Protein GI | 26992015 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000407019 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTGGTTTG CCTGCAGCCC CGGATATCGG CACATAACTT GCTCCGTAAT GCGTCCCAGC
CAAACGGGAT TACCCAGCAT GCTGCACAGC CACCTGACCA CCCTCAACGC AGTTTCGCTG
ATCCTCAACG TCTTCCAGGC AGACGGTTGC GAGGCGTCGG CGTTGCTGGC CGGCAGCGGC
ATTGGCCCGG CAGACCTGGG GCATGCCGAT GCGCGCATCA CCACCCAGCA GGAGCTGCAG
GTTTGCGCCA ATGCTGTGGC CCGGCGCGAG GACATTGGCC TGGAACTGGG CCAGCGCATG
CGCGTGTCGT GCTACGGCAT GCTCGGTTAC GCGCTGCTCT CCAGTGCCAC TTTGGGTGAC
GCCCTACGCC TGGCGCTGCA GTATCCGGCA CTGCTGGGAA CAGTCTTCAA GCTGCGCTTG
CTCGACGACG GCCAACGTGT CTGGTTCAGC GCCAGCGATT ACCAGGACAG CCCGGCGCTG
AGCGCTTTCA ACGCCGAGTT CTGCCTGGTG TCGCTGAAAG TCATCTGTGA TGACCTGCTT
GGCCGGCCGT TGCCGCTGCT TGGCGCACGC TTCGAACACC CTCGCCCTGG TTACCACGCG
CTCTATGCCG GAGCCTTTCA ATGCCCGATC GGTTTCGCCG CCGAGGACAA TGCCTTTGCC
TTCGAACGGC GATGGCTGGA TATGCCGCTG CCGCTGGCCG ACCCGATTAC TCACAAAGCC
ATGAGCGAGC GCTGCCGGCG CCTGAACCTT GAATTCACCG GTCGCCAGGC ATGGCTGGGA
CGGATTCGCC AGCTGCTGGC GCAGCAACTG GACGCAGCAC CCGGGCTGGA AGGGCTTGCG
CGGCAGATGA ACTGCTCTTC GCGCACCCTG CGCCGGCATT TGCAGGCGCT GGGCAGCAGT
TATCAACAGC TGTTGGACGA GCTGAGGTTC GAGCGGGCCA AGCAGTTGCT GGCCGATGAA
CAGATGCCGA TCTACCGGAT TGCAGAGACT TTGGGGTTCA GTGAGACGGC CAGTTTTCGG
CATGCCTTCC AGCGCTGGAG TGGCGTGGCG CCCAGCCATT TTCGTGGTTG A
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| Protein sequence | MWFACSPGYR HITCSVMRPS QTGLPSMLHS HLTTLNAVSL ILNVFQADGC EASALLAGSG
IGPADLGHAD ARITTQQELQ VCANAVARRE DIGLELGQRM RVSCYGMLGY ALLSSATLGD
ALRLALQYPA LLGTVFKLRL LDDGQRVWFS ASDYQDSPAL SAFNAEFCLV SLKVICDDLL
GRPLPLLGAR FEHPRPGYHA LYAGAFQCPI GFAAEDNAFA FERRWLDMPL PLADPITHKA
MSERCRRLNL EFTGRQAWLG RIRQLLAQQL DAAPGLEGLA RQMNCSSRTL RRHLQALGSS
YQQLLDELRF ERAKQLLADE QMPIYRIAET LGFSETASFR HAFQRWSGVA PSHFRG
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