Gene PP_5336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5336 
SymbolpurE 
ID1042159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp6083035 
End bp6083526 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content65% 
IMG OID637148735 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionNP_747437 
Protein GI26992012 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00140145 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGCAC TGGTTGGCGT GATCATGGGC TCCAAGTCCG ATTGGTCCAC CCTTAGCCAC 
ACCGCCGATA TGCTGGAAAA ACTCGGCATT CCCTACGAAG TGAAGGTGGT TTCCGCCCAC
CGCACCCCGG ATCTGCTGTT CCAGTATGCC GAGGAGGCTG AGGGCCGTGG CATCGAGGTG
ATCATCGCCG GTGCCGGTGG CGCAGCCCAC CTGCCAGGCA TGTGCGCCGC CAAGACCCAC
CTGCCGGTGC TGGGCGTGCC GGTGCAGTCG TCGATGCTGT CGGGCGTCGA TTCGCTGCTG
TCGATCGTGC AGATGCCAGC CGGTGTGCCG GTTGCCACCC TGGCCATCGG CCGTGCCGGT
GCGGTCAACG CTGCCCTGCT GTCGGCCAGC ATTCTGGGCG CCAAGTACCC GCAGTACCAC
GCGGCGTTGA AGCAGTTCCG CACGGAACAG ACCGACACCG TGCTGGACAA CCCAGACCCG
CGCCAGGCTT GA
 
Protein sequence
MSALVGVIMG SKSDWSTLSH TADMLEKLGI PYEVKVVSAH RTPDLLFQYA EEAEGRGIEV 
IIAGAGGAAH LPGMCAAKTH LPVLGVPVQS SMLSGVDSLL SIVQMPAGVP VATLAIGRAG
AVNAALLSAS ILGAKYPQYH AALKQFRTEQ TDTVLDNPDP RQA