Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5332 |
Symbol | |
ID | 1042133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 6080048 |
End bp | 6080944 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637148731 |
Product | aldose 1-epimerase |
Protein accession | NP_747433 |
Protein GI | 26992008 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0676] Uncharacterized enzymes related to aldose 1-epimerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0046695 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTACCT TTCAGGTCGT AACCGAGCAA CATGGCGAAC TCAACTGCTG GCGTATCAGC AGTGACCGTG CCGAACTCCT GATCGCCCAG CAGGGCGCAC AGGTCCTCAG CTACCAGCAG GTAGGCGAAC CGCCGCTGCT GTGGCTGAGC GACCAGGCCA TCTTCCGCCA GGGCAAGTCG GTACGCGCCG GGGTACCGGT GTGCTGGCCA TGGTTTGGCA ACCTGCAGCG CAACCCTCAG GCCGTCCAGG CCATGTACCA GGGAACACCA GCGCCTGCCC ACGGGCTTGC GCGCACGCGT GACTGGCAAT TGCTGGGTAT CGAGGAAGTG GGCGAAACCC TGCGGATCGA GTTCGAACTG CCTGAAGCGC AGGGCGACCT GCCCGGTTGG CCCCATGATG TCGAGCTGAA ACTGGTGGTG GAGATGGGCG CAGAGCTGAA ACTGAGCCTG ACCAGCCGCA ACATGGGCAA TACCCCCGTG ACCATCAGCC AGGCCCTGCA TAGCTACTTC GCGGTCAGCG ATGTGCGCCA GGCGCGGGTC GAGGGCGTCG ACGGGCTGGG TTATATCGAA ACCCTGGCGG GCTGGGAACA GCGCCAGCAG CAGGGGGCAC TGACGTTTGC CGGGGAGACG GACCGGATCT ACCTGAACAC CCCGCAGACC CTCAGCATCG TCGACCCGCA TTGGAATCGG CGGATTACCT TGACCAGCAG CGGCTCGCGC TCGGCGGTGA TCTGGAACCC GTGGACCGAG CGGGCCAAGG AGCTGGCGGA CATGGCTGAC GATGGATGGC AGCGAATGCT GTGCATCGAG ACAGCGAATG TGTGGGATGA CCTGGTGGAG TTGAAGCCTG GGGCGAGTCA TTCGCTGGGC GTCCAGATCG GTTGTGAAAA TATCTGA
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Protein sequence | MATFQVVTEQ HGELNCWRIS SDRAELLIAQ QGAQVLSYQQ VGEPPLLWLS DQAIFRQGKS VRAGVPVCWP WFGNLQRNPQ AVQAMYQGTP APAHGLARTR DWQLLGIEEV GETLRIEFEL PEAQGDLPGW PHDVELKLVV EMGAELKLSL TSRNMGNTPV TISQALHSYF AVSDVRQARV EGVDGLGYIE TLAGWEQRQQ QGALTFAGET DRIYLNTPQT LSIVDPHWNR RITLTSSGSR SAVIWNPWTE RAKELADMAD DGWQRMLCIE TANVWDDLVE LKPGASHSLG VQIGCENI
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