Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5322 |
Symbol | |
ID | 1042179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 6067349 |
End bp | 6068689 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637148721 |
Product | hypothetical protein |
Protein accession | NP_747423 |
Protein GI | 26991998 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0259905 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCCTT CCTCTGGTAT TAGCCTCACC TCGTTATTCG CCGACTTCGG CATGATCATC TTTGCCTTCC TGCTGGTGCT GCTCAACGGC TTCTTCGTTG CTGCGGAGTT CGCCATGGTC AAGCTGCGCG CTACACGCGT AGAGGCCATC GCCGAAAAGC ACGGCTGGCG TGGCAACATC CTGCGCAAGG TTCACAACCA GCTCGACGCC TACCTGTCGG CCTGCCAATT GGGCATCACC CTCGCCTCGC TGGGCCTGGG CTGGGTGGGT GAGCCCGCCT TCGCCCACTT GCTGGAACCA TTGCTGGCCT ATCTCGGCGT GGACAGCGCC GAGCTGGTCA AGGCGATCTC GTTCTTCGTC GCCTTCTTCG TCATCTCGTA CCTGCACATC GTGGTCGGCG AACTGGCCCC CAAGTCCTGG GCTATCCGCA AGCCAGAGCT GCTGTCGCTG TGGACCGCCG TGCCGCTTTA CCTGTTCTAC TGGGCGATGT ACCCGGCCAT CTACCTGCTC AATGCCAGCG CCAACACCAT CCTGCGCATT GCCGGCCAGG GCGAGCCTGG CCCGCACCAT GAGCACCACT ACAGCCGCGA AGAACTCAAG CTGATCCTGC ACTCCAGCCG TGGCCAGGAC CCAAGCGACC AAGGCATGCG CGTGCTGGCC TCGGCCGTGG AAATGGGCGA GCTGGAAGTG GTCGACTGGG CCAACTCGCG TGAGGACATG ATCAGCATCG ACGCCCATGC GCCTCTGAAG CAGATCCTGG CCCTGGTGCG CCGCCACAAG TTCAGCCGCT ACCCGGTGTA CGACGCCGAG CGCGAAGAAT TCACCGGCCT GCTGCACATC AAGGACCTGC TGCTGGAGCT GGCTGAGCTG GAGCACTTGC CAGAGACCAT CGACCTGGAG GACCTTGCCC GGCCACTCGA ACGCGTGTCG CGGCACATGC CGCTGGCACA GTTGCTGGAG CAGTTCCGTA AGGGCGGCGC GCACTTCGTG CTGGTCGAGG AAGCCGATGG CAAGGTGATC GGCTACCTGA CCATGGAAGA CGTGCTGGAA GTGCTGGTAG GCGACATCCA GGACGAGCAC CGCAAGACCG AGCGTGGCAT TCTTGCCTAC CAGCCGGGCA AGCTGCTGGT GCGTGGCGAC ACCCCACTGT TCAAGGTCGA GCGCCTGCTG GGTATCGACC TTGACCACAT CGAGGCCGAA ACCCTGGCCG GGTTGATCTA CGAGACGCTC AAGCGCGTGC CTGAAGAAGA GGAAGTGCTG GAGGTCGAAG GGCTGCGCAT CATCATCAAG AAGATGAAAG GCCCCAAGAT CGTACTGGCC AAGGTGCTGA AGCTGGATTG A
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Protein sequence | MDPSSGISLT SLFADFGMII FAFLLVLLNG FFVAAEFAMV KLRATRVEAI AEKHGWRGNI LRKVHNQLDA YLSACQLGIT LASLGLGWVG EPAFAHLLEP LLAYLGVDSA ELVKAISFFV AFFVISYLHI VVGELAPKSW AIRKPELLSL WTAVPLYLFY WAMYPAIYLL NASANTILRI AGQGEPGPHH EHHYSREELK LILHSSRGQD PSDQGMRVLA SAVEMGELEV VDWANSREDM ISIDAHAPLK QILALVRRHK FSRYPVYDAE REEFTGLLHI KDLLLELAEL EHLPETIDLE DLARPLERVS RHMPLAQLLE QFRKGGAHFV LVEEADGKVI GYLTMEDVLE VLVGDIQDEH RKTERGILAY QPGKLLVRGD TPLFKVERLL GIDLDHIEAE TLAGLIYETL KRVPEEEEVL EVEGLRIIIK KMKGPKIVLA KVLKLD
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