Gene PP_5318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5318 
SymbolubiA 
ID1042212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp6063660 
End bp6064550 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content63% 
IMG OID637148717 
Product4-hydroxybenzoate octaprenyltransferase 
Protein accessionNP_747419 
Protein GI26991994 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID[TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.024935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACCTGC AACTGCTCAA GTCGCTCAAC CGCCTGCACC CACGGGCCTG GGACTTCGTC 
CAGCTCAGCC GCATGGACCG GCCGATAGGC ATCTACCTGC TGTTGTGGCC GACCCTGTCG
GCAGTGTGGA TTGCCGGCAA TGGGTCACCC ACCCTGGCCA ATGTGCTCAT CTTCGGCCTT
GGTGTGGTGC TGATGCGCGC GGCCGGCTGC TGCATCAACG ACTTTGCCGA CCGCAAGGTT
GACGGCCACG TCAAGCGCAC AGCAGACCGC CCCTTGGCCA GCGGCCGGGT GCGGCCACGC
GAGGCGCTGA CACTGTTCGC GATTCTGGTC GGGGTGAGTT TCCTGCTGGT GCTGTGCACC
AACAGCCGCA CTGTCTGGCT GTCGTTCGGG GCGGTGGCCT TGGCGTTCTG CTACCCGTTC
ATGAAGCGCT ACACCTACTA CCCGCAGGTG GTGCTGGGGG CGGCGTATTC GTGGGGCATT
CCCATGGCTT TCACAGCCGC TGGCGGTGAA CTGCCGGCCG GCGCCTGGCT GCTGTATATC
GCCAACCTGC TGTGGACGGT AGGCTACGAC ACCTACTACG CCATGGTCGA CCGCGATGAC
GACCTGAAGA TTGGCGTGAA ATCCACCGCG ATCCTGTTCG GCGACGCTGA TCGCAGCATC
ATCCTGACCC TGCAGCTGCT GTCGCTGGGC TGCCTGTTGC TGGCCGGTAG CCGCTTCGAC
CTGGGTGGCT GGTTCCACCT TGGGTTGCTG GGTGCGGCGG CGTGCTTTGC CTGGGAATAC
TGGTCAACGC GCAAGCTGGA CCGGGAATCG TGCTTCAAGG CATTTCTGCA CAACCACTGG
GCGGGGATGC TGGTGTTTAT CGGAGTTGTG CTGGATTACG CGTTGCGCTG A
 
Protein sequence
MYLQLLKSLN RLHPRAWDFV QLSRMDRPIG IYLLLWPTLS AVWIAGNGSP TLANVLIFGL 
GVVLMRAAGC CINDFADRKV DGHVKRTADR PLASGRVRPR EALTLFAILV GVSFLLVLCT
NSRTVWLSFG AVALAFCYPF MKRYTYYPQV VLGAAYSWGI PMAFTAAGGE LPAGAWLLYI
ANLLWTVGYD TYYAMVDRDD DLKIGVKSTA ILFGDADRSI ILTLQLLSLG CLLLAGSRFD
LGGWFHLGLL GAAACFAWEY WSTRKLDRES CFKAFLHNHW AGMLVFIGVV LDYALR