| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5309 |
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| Symbol | |
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| ID | 1042238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 6055865 |
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| End bp | 6056791 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637148708 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | NP_747410 |
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| Protein GI | 26991985 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.164035 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTTA CAGAATTACG CTACATCGTC ACACTCGCCC AGGAACAGCA CTTCGGCCAT
GCCGCCGAGC GCTGTCACGT GAGCCAACCC ACCCTGTCGG TCGGTGTGAA GAAGCTCGAG
GACGAGCTTG GCGTTCTGAT CTTCGAGCGC AGCAAAAGCG CAGTACGCCT GACCCCGGTC
GGCGAAAACA TCGTCGCCCA AGCGCAGAAA GTACTGGAGC AGGCCCAGGG CATTCGCGAG
CTGGCCCAGG CCGGCAAGAA TCAGCTGACC GCTCCGCTCA AGGTCGGCGC CATCTACACC
GTCGGCCCCT ACCTGTTCCC GCACCTGATC CCGCAGCTGC ACCGCGTGGC GCCGCAAATG
CCGCTGTACA TCGAAGAAAA CTTCACCCAC GTACTGCGTG AAAAGCTGCG CAACGGCGAA
CTGGACGCGG TGATCATCGC CCTGCCGTTC AACGAAGCCG ACGTGCTGAC GCTACCGCTA
TACGATGAAC CGTTCTGCGC CCTGATGCCT GCCGACCACC CATGGACGGC GAAAAAGACC
ATCGACACCG CCATGCTCAA TGACAAGAGC CTGTTGCTGC TTGGTGAGGG CCACTGCTTC
CGTGACCAGG TACTGGAAGC CTGCCCTACC CTGAACAAGG GGGGTGAAGG CTCAAGGCAC
ACCACGGTCG AGTCCAGCTC ACTGGAAACC ATCCGTCACA TGGTGGCTTC CGGCCTTGGC
GTATCGATCT TGCCGCTGTC GGCAGTGCAC AGCCACCACT ATGCCCCCGG CGTCATCGAA
GTGCGCCCGT TGACGGCACC GGCACCGTTC CGCACGGTAG CCATCGCCTG GCGCGCCAGC
TTCCCGCGGC CAAAGGCCAT CGAGATCCTC GCCGATTCGA TCCGCCTGTG CTCGGTCGCC
AAAAACCCTG CGGAACAACC GGCCTGA
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| Protein sequence | MTLTELRYIV TLAQEQHFGH AAERCHVSQP TLSVGVKKLE DELGVLIFER SKSAVRLTPV
GENIVAQAQK VLEQAQGIRE LAQAGKNQLT APLKVGAIYT VGPYLFPHLI PQLHRVAPQM
PLYIEENFTH VLREKLRNGE LDAVIIALPF NEADVLTLPL YDEPFCALMP ADHPWTAKKT
IDTAMLNDKS LLLLGEGHCF RDQVLEACPT LNKGGEGSRH TTVESSSLET IRHMVASGLG
VSILPLSAVH SHHYAPGVIE VRPLTAPAPF RTVAIAWRAS FPRPKAIEIL ADSIRLCSVA
KNPAEQPA
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