| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5307 |
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| Symbol | exbD |
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| ID | 1042225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 6054614 |
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| End bp | 6055042 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637148706 |
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| Product | biopolymer transport protein ExbD |
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| Protein accession | NP_747408 |
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| Protein GI | 26991983 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02803] TonB system transport protein ExbD, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.153689 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGCCTGC ATCTCAACGA AGGTGGCGAC GACCTCGCCG AAAACCACGA AATCAACGTT
ACGCCGTTCA TCGACGTGAT GCTGGTGCTG CTGATCATCT TCATGGTCGC CGCTCCCTTG
GCTACGGTCG ACATCAAGGT CGACCTGCCG GCCTCAACCG CCAAACCGGC GCCAAGGCCG
GAGAAACCGG TGTTCGTCAG CGTCAAGGCC GACCAGAAGC TGTATGTCGG CGACGATCAG
GTTGCTGCAC CCGACCAGCT TGGCCCGATG CTCGACGCCA AGACCAAGGG TGACAAGGAA
ACCACCATCT TTTTCCAGGC TGACAAAGGC GTGGATTACG GCGACCTGAT GGAAGTGATG
AACAACATGC GCGCGGCCGG CTACCTGAAA GTCGGTCTGG TAGGTCTCGA GACGGCAGCC
AAGAAATGA
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| Protein sequence | MGLHLNEGGD DLAENHEINV TPFIDVMLVL LIIFMVAAPL ATVDIKVDLP ASTAKPAPRP
EKPVFVSVKA DQKLYVGDDQ VAAPDQLGPM LDAKTKGDKE TTIFFQADKG VDYGDLMEVM
NNMRAAGYLK VGLVGLETAA KK
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