| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5302 |
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| Symbol | spoT |
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| ID | 1042219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 6049130 |
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| End bp | 6051238 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637148701 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | NP_747403 |
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| Protein GI | 26991978 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.179069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGGTA TAGAAGCCTT GGCCGAACGG CTTTCGACCT ATCTTGGCCC CGAACAGGTC
AACCTGGTTC GGCGTGCCTA TTTCTACGCC GAACAGGCCC ACGATGGGCA ACGCCGCCGC
AGTGGCGAGC CCTACGTGAC CCACCCGCTG GCCGTGGCCA GCATCCTCGC CGACATGCAC
ATGGACCATC AGAGCCTGAT GGCGGCCATG CTGCACGATG TGATCGAAGA CACCGGCATC
GCCAAGGAAG CCCTCAGCCA GCAGTTTGGC GAGACCGTGG CCGAATTGGT CGATGGGGTC
AGCAAGCTGA CCCAGATGAA TTTCGAGACC AAGGCCGAGG CGCAGGCGGA AAACTTCCAG
AAGATGGCCA TGGCCATGGC CCGCGATATC CGCGTGATCC TGGTCAAGCT GGCCGACCGC
CTGCACAACA TGCGCACCCT GGAAGTGCTG TCTGGCGAAA AGCGCCGGCG CATTGCCAAG
GAAACCCTCG AGATCTACGC CCCCATCGCA AACCGCCTGG GGATGCACAC CGTGCGCGTA
GAGTTCGAAG ACCTTGGCTT CAAGGCCATG CACCCGATGC GCTCGTCGCT GATTCATCGT
GCAGTGAAGA GCGCGCGCGG CAACCGCAAA GAGATCGTCG CCAAGATCGA GCACTCGCTG
GCCAACTGCC TGGCCGCCGA CGGCATCGAG GGCGAAGTCA GCGGTCGGCA GAAACACCTC
TATGGCATCT ACAAGAAGAT GCGCGGCAAG CGCCGTGCCT TCAACGAGAT CATGGACGTG
TATGCCTTCC GCATCATCGT CGACAAGGTT GACACCTGTT ACCGCGTGCT CGGCGCCGTA
CACAACCTGT ACAAGCCGCT GCCCGGACGC TTCAAGGATT ACATCGCGAT CCCCAAGGCC
AACGGCTACC AGTCGTTGCA CACCACCCTG TTCGGCATGC ACGGCGTGCC CATCGAAATC
CAGATTCGCA CCCGCGAAAT GGAAGAGATG GCCAACAACG GCATCGCCGC GCACTGGCTG
TACAAGTCAA ACGACGACGA GCAGCCCAAG GGCAGCCACG CGCGCGCCCG CCAGTGGGTC
AAGGGTATCC TTGAACTGCA GCAACGTGCC GGCAACTCCC TGGAATTCAT CGAGAGCGTG
AAGATCGACC TGTTCCCGGA CGAGGTCTAC GTGTTCACGC CCAAAGGCCG GATCATGGAG
TTGCCCAAAG GCTCCACGGC CGTCGACTTC GCCTACGCGG TCCACACCGA CGTCGGCAAC
AGTTGCATCG CTTGCCGCAT CAACCGCCGC CTGGCGCCGC TGTCCGAACC GCTACAAAGC
GGCTCGACAG TGGAAATCGT CAGCGCCCCG GGCGCTCGGC CAAACCCGGC ATGGCTCAAC
TTTGTGGTCT CGGGCAAGGC ACGCACGAAT ATCCGCCACG CGCTCAAGCA ACAGCGCCGC
TCGGAGTCCA TCAGCCTGGG CGAGCGCCTG CTGAACAAGG TACTCACTGG CTTCGACAGC
AGCCTGGAGA AAATCCCCCA GGAACGCATC CAGTCTATTC TCGCCGAGTA CCGCCTGGAG
CTCATAGAAG ACCTGCTCGA AGACATCGGC CTGGGCAACC GCATGGCCTA CGTGGTCGCG
CGCCGCCTGC TGTCGGCCGA AGGCGAACAG CTGCCGGCGC CAGAAGGCCC ACTGGCGATC
CGCGGCACCG AAGGCCTGGT GCTCAGCTAC GCCAAGTGCT GCACGCCGAT CCCGGGTGAC
CCGATTGTCG GCCACCTGTC GGCCGGCAAG GGCATGGTCG TGCACCTGGA GAACTGCCGC
AACATCAGTG AAATCCGCCA CAACCCCGAA AAGTGCGTGC AACTCTCCTG GGCCAAGGAC
ATCACTGGCG AGTTCAATGT CGAACTGCGT GTCGAACTGG AACACCAGCG CGGGCTGATC
GCCCTGCTGG CCAGCAGCGT CAACGCCGCC GACGGCAACA TTGAGAAGAT CAGCATGGAC
GAACGCGACG GCCGTATCAG CGTGGTCCAA CTGGTGGTCA GCGTGCACGA CCGCGTGCAC
CTGGCGCGTG TGATCAAGAA GCTGCGTACC CTGACCGGTG TGGTCCGCAT CACCCGCATG
CGTACGTAG
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| Protein sequence | MPGIEALAER LSTYLGPEQV NLVRRAYFYA EQAHDGQRRR SGEPYVTHPL AVASILADMH
MDHQSLMAAM LHDVIEDTGI AKEALSQQFG ETVAELVDGV SKLTQMNFET KAEAQAENFQ
KMAMAMARDI RVILVKLADR LHNMRTLEVL SGEKRRRIAK ETLEIYAPIA NRLGMHTVRV
EFEDLGFKAM HPMRSSLIHR AVKSARGNRK EIVAKIEHSL ANCLAADGIE GEVSGRQKHL
YGIYKKMRGK RRAFNEIMDV YAFRIIVDKV DTCYRVLGAV HNLYKPLPGR FKDYIAIPKA
NGYQSLHTTL FGMHGVPIEI QIRTREMEEM ANNGIAAHWL YKSNDDEQPK GSHARARQWV
KGILELQQRA GNSLEFIESV KIDLFPDEVY VFTPKGRIME LPKGSTAVDF AYAVHTDVGN
SCIACRINRR LAPLSEPLQS GSTVEIVSAP GARPNPAWLN FVVSGKARTN IRHALKQQRR
SESISLGERL LNKVLTGFDS SLEKIPQERI QSILAEYRLE LIEDLLEDIG LGNRMAYVVA
RRLLSAEGEQ LPAPEGPLAI RGTEGLVLSY AKCCTPIPGD PIVGHLSAGK GMVVHLENCR
NISEIRHNPE KCVQLSWAKD ITGEFNVELR VELEHQRGLI ALLASSVNAA DGNIEKISMD
ERDGRISVVQ LVVSVHDRVH LARVIKKLRT LTGVVRITRM RT
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