Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5301 |
Symbol | rpoZ |
ID | 1042214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 6048807 |
End bp | 6049070 |
Gene Length | 264 bp |
Protein Length | 87 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637148700 |
Product | DNA-directed RNA polymerase subunit omega |
Protein accession | NP_747402 |
Protein GI | 26991977 |
COG category | [K] Transcription |
COG ID | [COG1758] DNA-directed RNA polymerase, subunit K/omega |
TIGRFAM ID | [TIGR00690] DNA-directed RNA polymerase, omega subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.337181 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.206293 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGCG TAACTGTTGA AGACTGCCTG GAACACGTGG ATAACCGCTT TGAGCTGGTC ATGCTCTCGA CCAAGCGCGC TCGCCAGCTG GCGACCGGCG GCAAAGAGCC ACGCGTTGCG TGGGAAAACG ACAAGCCAAC CGTTGTTGCC CTGCGTGAAA TTGCCGAAGG CATCGTCACC AACGAGTTCA TCGCCGCTGA AGAGATCGTC ACCGAGGATC CGGTGTTCGC CGCGTTCGAG GACGAGAACA ACGAGGCTGT CTGA
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Protein sequence | MARVTVEDCL EHVDNRFELV MLSTKRARQL ATGGKEPRVA WENDKPTVVA LREIAEGIVT NEFIAAEEIV TEDPVFAAFE DENNEAV
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