Gene PP_5298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5298 
Symbol 
ID1042245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp6045334 
End bp6046101 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content65% 
IMG OID637148697 
Productpeptidase C26 
Protein accessionNP_747399 
Protein GI26991974 
COG category[R] General function prediction only 
COG ID[COG2071] Predicted glutamine amidotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.880812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.49084 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAA ATGCGGTCCC TTTGATCGGT GTCAGCGCCT GCCGTCAGCA GGTAGGGAAG 
AACTCCTCGC ACACGGTCGG CGACAAGTAT GTCGAGGCGG CCGGCTTTGC CGGCTTGCCA
CTGATCTTGC CGGCCCGTGA TGGCGGCAGC GACACGCAAG CGCTGCTGGC TCGCCTGCAC
GGCATTGTTT TTACCGGCTC GCCTTCAAAT ATCGAGCCGC ATCATTACAA TGGCGCCCCC
AGTGTGGCGG GTACCCGGCA TGATCTGGCG CGTGATCGCC TGACCCTGCC GCTGTTGCAG
GCAGCCATTG CCGTCGGTGT GCCCGTATTC TGCATCTGCC GAGGCTACCA GGAGCTGAAC
GTGGCCCTTG GCGGCAGCCT GCACCAGCGT GTGCAGGAAC TGCCTGGCTA CCTTGACCAC
CGCGAACCTG AGGACGCCCC CCTGGAGGTG CAATACGGCC CTCGCCACTC GGTCAGCATC
GAGCCTGGCG GGTTGTTCGA GCGCCTGGGG TTGGTGGCGC AGTTCGAGGT CAATTCGCTG
CACAGCCAGG GCATCGACCG TCTGGCCCCA GGCCTGCGCG TCGAGGCACG GGCCCCGGAT
GGCCTGATCG AGGCGGTGTC CATGCCTGCG GCACCGGGCT TTGTGCTTGG GGTGCAGTGG
CACCCGGAGT GGCGCTTCAA CGAAAACCCG GTCTCGCTGC GTCTGTTTCA GGCGTTTCGC
GAGGCCTGCA ATGCCTACGC AGCACGGGAG GGCTTACGGC AGGAATGA
 
Protein sequence
MSANAVPLIG VSACRQQVGK NSSHTVGDKY VEAAGFAGLP LILPARDGGS DTQALLARLH 
GIVFTGSPSN IEPHHYNGAP SVAGTRHDLA RDRLTLPLLQ AAIAVGVPVF CICRGYQELN
VALGGSLHQR VQELPGYLDH REPEDAPLEV QYGPRHSVSI EPGGLFERLG LVAQFEVNSL
HSQGIDRLAP GLRVEARAPD GLIEAVSMPA APGFVLGVQW HPEWRFNENP VSLRLFQAFR
EACNAYAARE GLRQE