Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5297 |
Symbol | |
ID | 1042243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 6043673 |
End bp | 6045280 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637148696 |
Product | amino acid ABC transporter permease |
Protein accession | NP_747398 |
Protein GI | 26991973 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00229664 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.376722 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAAA GCGAGCCTTG TACCCAAGGC TTGTTAAAAC AATTCCAAAA TTTACGGCAA ATACTCATGA GCAATTACAC AGAAGCCGGC CGCCCACCCG ATGTGGCGGC CGACGCGGGC AACACTCAGC GCAGCAAAGG CCTGGCCAAG GGCCGCTTGG GGCTGCTGGC CAGCGTGGTG CTGGGCATTT CCACCATCGC CCCGGTCTAT ACCCTGACCG GCGCCCTTGG CCCTACCGTG CGTGAGGTGG GCGCCCACCT GCCGGCCGTG TTCATCGTGG GCTTCTTGCC GATGCTGCTG GTGGCCCTGG GCTATCGCGA GCTGAACTCG GCGGAGCCTG ACAGCGGTAC TTCGTTTACC TGGTCGGCGC GTGCATTCGG CCCGATGATC GGCTGGATCG GCGGCTGGGG ACTGGTGGTT GCCACCACGA TCGTGCTGTC GAACCTGGCA GGTGTGGCGG TGGATTTCTT CTACCTGTTC CTTGGCCAGA TCACCGGCAA GCATGAGCTG GCAGCGTTGG CCGACAACCT GTTGATCAAC ATCGTTACCT GTTGCGTGTT CATTGGCCTG GCAGTGTGGA TCTGCTGTCG GGGTATCGCC ACCACAATGA CCGTGCAGTA CGGCTTGGTG GCCCTGCAGC TGTTGGTGTT GATCGGCTTT GCTTTCGCCG CTTTCGGCGG CACTACCGCG CCGCCACCGC TGGCGTTCGA TTTCGCCTGG TTCAACCCGT TCGGTGTCGA GTCGTTCTCG GCCTTTGCCG CTGGCCTGTC ATTGTCGATC TTCATCTTCT GGGGCTGGGA CACTTGTCTG ACCGTCAGTG AAGAGTCGGT GGGCAGCGAA GAGGTGCCGG GCAAGGCCGC TACCTGGACC GTGATGTTGA TCCTGGGCCT GTACCTGTTC ACCGCCATCG CCACCCTGCA GTTTGCCGGT ATCAGTGAAA CGGGTCTGGG CCTGAACAAC CCGCGCATCC AGGAGAACGT CTTTGCCCAC CTGGCCGGCC CGGTCATGGG GCCGCTGGCG ATCCTGATGT CCATCGCCGT GCTGGCCAGT ACGGCGGCGT CGCTGCAGTC CACCTTCGTG GCGCCGGCGC GCACCCTGTT GGCCATGGGT TATTACGGTG CGGTACCGCA GAAGTTCGCC AGTGTCTGCC CGCGCTCGCA AACGCCGCGC TATGCCACCA TCTGCGCCGG CCTGGCCGCA GGCCTGTTCT ACGTGACCAT GCGTACGCTG AGCGAGAACG TGCTGGCAGA TACCATCACG GCATTGGGCA TGATGATCTG CTTCTACTAT TCGCTGACCG CGTTTGCCTG CGTCTGGTAT TTCCGCGGCA GCCTGTTCGA CAGCCTGCGC CACTTCATCA TGCGCGGCCT GTGCCCGCTG CTGGGGGGTG TTATCTTGTC GGTGATCTTC GTGCGCACCG CCATCGACAG TGCTTCGCCG GACTTTGGCA GCGGCTCGCA TGTGGGCGGG CTGGGGCTGG TGTTCGTGAT TGCCGCGATC ATCTCGGTGC TTGGCATCGG CCTGATGATG CTGTCGCGCA TGCGTGCGCC GGCGTACTTC CTCGGGGCTA CCCTGCGTCA GCAGGCTACC TTGCCGCTGC AGGACTAA
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Protein sequence | MSESEPCTQG LLKQFQNLRQ ILMSNYTEAG RPPDVAADAG NTQRSKGLAK GRLGLLASVV LGISTIAPVY TLTGALGPTV REVGAHLPAV FIVGFLPMLL VALGYRELNS AEPDSGTSFT WSARAFGPMI GWIGGWGLVV ATTIVLSNLA GVAVDFFYLF LGQITGKHEL AALADNLLIN IVTCCVFIGL AVWICCRGIA TTMTVQYGLV ALQLLVLIGF AFAAFGGTTA PPPLAFDFAW FNPFGVESFS AFAAGLSLSI FIFWGWDTCL TVSEESVGSE EVPGKAATWT VMLILGLYLF TAIATLQFAG ISETGLGLNN PRIQENVFAH LAGPVMGPLA ILMSIAVLAS TAASLQSTFV APARTLLAMG YYGAVPQKFA SVCPRSQTPR YATICAGLAA GLFYVTMRTL SENVLADTIT ALGMMICFYY SLTAFACVWY FRGSLFDSLR HFIMRGLCPL LGGVILSVIF VRTAIDSASP DFGSGSHVGG LGLVFVIAAI ISVLGIGLMM LSRMRAPAYF LGATLRQQAT LPLQD
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