Gene PP_5293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5293 
Symbol 
ID1042247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp6040800 
End bp6041168 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content58% 
IMG OID637148692 
Producthypothetical protein 
Protein accessionNP_747394 
Protein GI26991969 
COG category[S] Function unknown 
COG ID[COG3296] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.44714 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATT CGAACCTGTC GATCACCCCG CCCAATGCCG AAATCCGGCA ATGGGCGATG 
TTCTGCCACC TCTCCGCGCT GTTGGGCCTG GTAGTGCCGC TTGGGCACCT GCTGGGCCCG
CTGGTGCTAT GGCACCTCAA GCGCGAGCAA GACCCTTTTA TCGACGCCCA GGGCAAAGAG
GCGCTGAACT TTCAGATCAG CGTGACCATT GCCGGGTTCA TCTGCTTCCT GCTGATGTTC
GTGTTTATCG GGCTGGTGCT GTTTGCCATG CTCACGGTGG CAGTGATGAT ATTGATCATC
ATCGCGGCGG TGCGGGCGAA TGAGGGCAAG CCTTATCGCT ACCCGATGAT CTGGCGGCCG
ATCAAATAA
 
Protein sequence
MSDSNLSITP PNAEIRQWAM FCHLSALLGL VVPLGHLLGP LVLWHLKREQ DPFIDAQGKE 
ALNFQISVTI AGFICFLLMF VFIGLVLFAM LTVAVMILII IAAVRANEGK PYRYPMIWRP
IK