Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5292 |
Symbol | crc |
ID | 1042227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 6039987 |
End bp | 6040766 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637148691 |
Product | exodeoxyribonuclease III Xth |
Protein accession | NP_747393 |
Protein GI | 26991968 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.328538 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGATCA TCAGTGTGAA CGTAAATGGC ATTCAGGCTG CGGCCGAGCG TGGTTTGCTC AGCTGGCTGC AAGCCCAGAA TGCCGACGTC ATCTGCCTTC AGGATACCCG CGCCTCGGCC TTTGAACTCG ACGACCCAGC TTTCCAGCTC GATGGCTATT TCCTTTATGC CTGCGACGCG GAGGTGCCTG CCCAAGGTGG TGTGGCCCTT TACTCGCGCA TGCAGCCCAA GGCAGTCATC ACCGGCCTGG GCTTCGAGAC AGCCGACCGC TACGGGCGTT ACCTGCAAGC AGATTTCGAC AAAGTCAGTA TTGCCAGCCT GCTGCTGCCT TCGGGCATGA ACGGCGACGA AGACTTGAAT CAGAAATTCA AGTTGATGGA CGACTTCGCC AAGTACCTGG ACAAGCAGCG TCGCAAGCGT CGCGAATACA TCTATTGCGG CTCGTTCTAC GTGGCGCAGC AGAAGCTCGA CATCAAGAAT TGGCGTGACA GCCAGCAGTC GCCGGGCTTC CTGGCGCCAG AACGCGCCTG GATGGATGCG ATCACTGGCG AGATGGGGTA TGTCGATGCC TTGCGCGAAG TCAGCCGTGA AGGCGACCAG TACAGCTGGT GGCCGGACAA CGAGCAGGCC GAGATGCTCA ACCTGGGGTA TCGGTTCGAC TACCAGATCC TCACCCCGGG CCTGCGCCGC TTCGTGCGCA ACGCTCGCCT GCCGCGTCAG CCACGCTTCT CCCAGCATGC ACCGCTGATC GTCGACTATG ACTGGACGCT GACCATCTAA
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Protein sequence | MRIISVNVNG IQAAAERGLL SWLQAQNADV ICLQDTRASA FELDDPAFQL DGYFLYACDA EVPAQGGVAL YSRMQPKAVI TGLGFETADR YGRYLQADFD KVSIASLLLP SGMNGDEDLN QKFKLMDDFA KYLDKQRRKR REYIYCGSFY VAQQKLDIKN WRDSQQSPGF LAPERAWMDA ITGEMGYVDA LREVSREGDQ YSWWPDNEQA EMLNLGYRFD YQILTPGLRR FVRNARLPRQ PRFSQHAPLI VDYDWTLTI
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