Gene PP_5279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5279 
Symbol 
ID1042288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp6029648 
End bp6030007 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content59% 
IMG OID637148678 
Producthypothetical protein 
Protein accessionNP_747380 
Protein GI26991955 
COG category[R] General function prediction only 
COG ID[COG3450] Predicted enzyme of the cupin superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATTG ATAGCATCAT CGACTTCGCG CAGGTCATCA CCGAGGCCGA ACGCTACCGC 
CCGGCTGCAG AGAAAATCCT CAAGGGCGAG CCGGACCAGG CGGTCTACAA CCACTATTCC
AGCCCGTGCG GGCAGTTTGC CGCTGGCGTA TGGGAAGGTG AGGTGGGCCA GTGGACAGTG
AACTACACCG AGCACGAATA CTGCGAGATC GTCCAAGGCG TTTCGGTGCT GCGCGACGAG
GATGGCGGGG CGAAAACCCT GCGTGCCGGC GATCGCTTTG TAATCCCCGC CGGCTTCAAA
GGCACTTGGG AGGTGCTGGA GCCTTGCCGC AAGATCTATG TGATGTTCGA GCAGAAGTAA
 
Protein sequence
MSIDSIIDFA QVITEAERYR PAAEKILKGE PDQAVYNHYS SPCGQFAAGV WEGEVGQWTV 
NYTEHEYCEI VQGVSVLRDE DGGAKTLRAG DRFVIPAGFK GTWEVLEPCR KIYVMFEQK