Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5268 |
Symbol | |
ID | 1042303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 6017461 |
End bp | 6018009 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637148667 |
Product | Cro/CI family transcriptional regulator |
Protein accession | NP_747369 |
Protein GI | 26991944 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG0662] Mannose-6-phosphate isomerase [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACGTCG GCGAACGACT GCAAGCCATC CGCAAGCTCA AGGGCCTGTC GCAGCGCGAA CTCGCCAAGC GTGCTGGCGT GACCAACAGC ACCATCTCGA TGATCGAGAA GAACAGCGTA AGCCCCTCTA TCAGCTCGCT GCGCAAAGTG CTTAGCGGCA TTCCCATGTC CATGGTCGAA TTCTTTTCGG TCGAGCTGGA GCCCCAAAGC CCCACTCAGA TCGTCTACAA GGCCCATGAG CTGATCGATA TCTCAGACGG TGCTGTGACC ATGAAGCTGG TGGGCAAGTC GCACCCCAAC CGTGCCATCG CTTTTCTGAC CGAGGTGTAC CCGCCAGGTG CGGACACCGG TGCCGAGATG CTCACCCACG ACGGCGAGGA GACCGGTATC CTGCTTGAAG GCCGCCTGGA GCTGGTGGTC GGCAACGAGA TTTTCGTTCT CGAAGAAGGC GACAGCTACT ACTTCGAAAG CACCCGCCCG CACCGCTTCC GCAACCCATT CGACCAGCCG GCGCGGCTGA TCAGTGCGGC GACGCCTTCA AACTTTTGA
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Protein sequence | MDVGERLQAI RKLKGLSQRE LAKRAGVTNS TISMIEKNSV SPSISSLRKV LSGIPMSMVE FFSVELEPQS PTQIVYKAHE LIDISDGAVT MKLVGKSHPN RAIAFLTEVY PPGADTGAEM LTHDGEETGI LLEGRLELVV GNEIFVLEEG DSYYFESTRP HRFRNPFDQP ARLISAATPS NF
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