Gene PP_5268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5268 
Symbol 
ID1042303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp6017461 
End bp6018009 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content60% 
IMG OID637148667 
ProductCro/CI family transcriptional regulator 
Protein accessionNP_747369 
Protein GI26991944 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG0662] Mannose-6-phosphate isomerase
[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACGTCG GCGAACGACT GCAAGCCATC CGCAAGCTCA AGGGCCTGTC GCAGCGCGAA 
CTCGCCAAGC GTGCTGGCGT GACCAACAGC ACCATCTCGA TGATCGAGAA GAACAGCGTA
AGCCCCTCTA TCAGCTCGCT GCGCAAAGTG CTTAGCGGCA TTCCCATGTC CATGGTCGAA
TTCTTTTCGG TCGAGCTGGA GCCCCAAAGC CCCACTCAGA TCGTCTACAA GGCCCATGAG
CTGATCGATA TCTCAGACGG TGCTGTGACC ATGAAGCTGG TGGGCAAGTC GCACCCCAAC
CGTGCCATCG CTTTTCTGAC CGAGGTGTAC CCGCCAGGTG CGGACACCGG TGCCGAGATG
CTCACCCACG ACGGCGAGGA GACCGGTATC CTGCTTGAAG GCCGCCTGGA GCTGGTGGTC
GGCAACGAGA TTTTCGTTCT CGAAGAAGGC GACAGCTACT ACTTCGAAAG CACCCGCCCG
CACCGCTTCC GCAACCCATT CGACCAGCCG GCGCGGCTGA TCAGTGCGGC GACGCCTTCA
AACTTTTGA
 
Protein sequence
MDVGERLQAI RKLKGLSQRE LAKRAGVTNS TISMIEKNSV SPSISSLRKV LSGIPMSMVE 
FFSVELEPQS PTQIVYKAHE LIDISDGAVT MKLVGKSHPN RAIAFLTEVY PPGADTGAEM
LTHDGEETGI LLEGRLELVV GNEIFVLEEG DSYYFESTRP HRFRNPFDQP ARLISAATPS
NF