| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5262 |
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| Symbol | |
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| ID | 1042301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 6007706 |
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| End bp | 6009094 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637148661 |
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| Product | multidrug efflux protein NorA |
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| Protein accession | NP_747363 |
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| Protein GI | 26991938 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00407645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGTCG CGCCCACCAC AGAACTCAAG GCTTTGCTGC GCCTGGCCGG GCCGCTGATT
GCCTCGCAGT TGGCGCACAT GCTGATGGTG CTGACCGACA CCCTGATGAT GGCCCGCATC
AGCCCTCAGG CTTTGGCGGG TGGTGGCCTG GGGGCAGCCA GCTATTCGTT CGTATCGATC
TTCTGCCTGG GCGTGATCGC CGCCGTCGGC ACGCTGGTGG CCATTCGCAA GGGTGCCAAC
GACATCGAAG GCGCCACCCG ACTGGCGCAG AACGGCCTGT GGCTGGCCTG GGCCTTGGCG
CTGTTCGCTG CGCTGGTGCT GTGGAATCTT GAACCTGTGC TGCTGCTTTT CGGGCAGAAG
CCCGAGAACG TGGCCTCGGC CGCCGAATTT CTCACCCTGC TGCCACTGGC CCTGCCCGGT
TATCTGACCT TCATGGCCTT GCGTGGCTTC ACCAGCGCGC TGGGTCGCTC GACCCCGGTG
ATGGTCATCA GTTTGTTCGG CACGGTGCTC AACTACCTGT TCAACGTGGC ACTGATCGAA
GGCATGTTCG GCTTGCCCAA GCTGGGCCTG ATGGGTATCG GTCTGGTCAC CGCAGTGGTG
TCGATGGGCA TGGCCACTGC CTTGGCGTTG TATATCCGCT GGCATCCGGC CTATACCGCC
TACCCGCTGC GCAAGGGCCT GTCACGCCCA TCACTGGCGG CCCTGCGCGA GCTGTGGCGG
CTGGGCCTGC CGATTGGCGG TACCTACATG GTGGAAGTGG GCCTGTTCGC CTTCGCCGCG
CTGTGCATGG GCGTGCTGGG CAGCACCGAA CTGGCGGCGC ACCAGATTGC CCTGCAGATC
GTGTCCACGG CATTCATGGT GCCGACTGGC TTGTCCTATG CGGTGACCAT GCGCGTCGGC
CTGTACTACG GCGCTGGCAA CCTGCTGGCG GCGCGCAGCG CCGGGCGGGT GGGCATCGGG
TTTGGGGCCA TGATCATGTT TGCCTTCGCC ACGCTGTTCC TGCTGCTGCC CGAAGCACTG
GTAGGCCTGT TCATCGACCG TAATGACCCG GCCTTTGCCG CGATCTTCCA GGTGGCCGTG
CAGTTGTTGA TGGTGGCGGC GTGGTTCGAA CTGTTCGACG GCATGCAGAC GATTGCCATG
GGCTCGATCC GTGGGTTGAA AGATGCCAAG ACCACCTTCC TGATCGGGCT GGTGTGCTAT
TGGCTGGTGG GGGCGCCGAG TGCCTGGCTG TTCACCTTTA CGCTGGGCGG TGGTGCAGTC
GGGATCTGGT GGGGGCTGGC GCTGGGGCTG GCATGTGCGG CGGTGGCGCT GACCTTTGGC
TTTGAGTGGC GGATGAAACG GTTGTTGGGT AAGGCGGGGG TTCGTACAGA AGCTGCTGTT
TCGGCCTGA
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| Protein sequence | MHVAPTTELK ALLRLAGPLI ASQLAHMLMV LTDTLMMARI SPQALAGGGL GAASYSFVSI
FCLGVIAAVG TLVAIRKGAN DIEGATRLAQ NGLWLAWALA LFAALVLWNL EPVLLLFGQK
PENVASAAEF LTLLPLALPG YLTFMALRGF TSALGRSTPV MVISLFGTVL NYLFNVALIE
GMFGLPKLGL MGIGLVTAVV SMGMATALAL YIRWHPAYTA YPLRKGLSRP SLAALRELWR
LGLPIGGTYM VEVGLFAFAA LCMGVLGSTE LAAHQIALQI VSTAFMVPTG LSYAVTMRVG
LYYGAGNLLA ARSAGRVGIG FGAMIMFAFA TLFLLLPEAL VGLFIDRNDP AFAAIFQVAV
QLLMVAAWFE LFDGMQTIAM GSIRGLKDAK TTFLIGLVCY WLVGAPSAWL FTFTLGGGAV
GIWWGLALGL ACAAVALTFG FEWRMKRLLG KAGVRTEAAV SA
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