Gene PP_5260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5260 
Symbol 
ID1042329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp6005129 
End bp6006523 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content65% 
IMG OID637148659 
Producthypothetical protein 
Protein accessionNP_747361 
Protein GI26991936 
COG category[S] Function unknown 
COG ID[COG5383] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.132132 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCA ACGATTTCGT CAGCCCAGAC AGCATCCGCG CGCAGTTCTC TGCCGCCATG 
TCGCTCATGT ACAAACAGGA AGTGCCGCTG TACGGCACGC TGCTGGAGCT GGTGAGCGAA
ATCAACCAGC AGGTGATGGC CCAGCAACCC GAAGTGGCAG AGGCCCTGCG CTGGACCGGC
GAAATCGAGC GCCTGGACCA GGAACGTCAC GGCGCCATCC GCGTCGGCAC CGCCGAAGAA
CTGGCCACCA TCGCCCGCCT GTTCGCCGTC ATGGGCATGC AACCGGTCGG CTATTATGAC
CTCAGCTCCG CTGGCGTACC GGTGCATTCC ACTGCCTTTC GCGCGGTGCA CGAGCAATCG
CTGCATGTCA GCCCGTTCCG TGTGTTCACC TCGCTGCTGC GCCTGGAGCT GATCGACAAC
CCGCAGTTGC GCGAGCTGGC ACAGAGCATC CTGGCCAAGC GCCAGATCTT CACCTCCCGC
GCCCTCGAAC TGATCGCCCA GTGTGAGCGC GAGGGTGGCC TTGACGCCGC GGATGCAGAG
ACGTTCGTGC AGGAAGCGCT GCACACCTTC CGCTGGCACC AGGACGCTAC CGTCACGGCC
GAGCAATACC AGCAGCTGCA CGACCAACAC CGCCTGATCG CCGATGTGGT GGCCTTCAAG
GGCCCGCACA TCAACCACCT GACCCCGCGT ACCCTGGATA TCGATGCAAT CCAGCTCGGC
ATGCCTGCCA AGGGCATCCC GCCGAAGGCC GTGGTTGAAG GCCCGCCCAC CCGCCGCCAC
CCGATCCTGC TGCGCCAGAC CAGCTTCAAG GCCCTGCAGG AAACGGTCGC CTTCCGCGAC
CAACAAGGCC GCGAAGGCAG CCACACCGCA CGCTTTGGCG AAATCGAGCA ACGCGGCGCG
GCGCTGACGC CGAAAGGTCG CCAGCTTTAC GACAAGTTGC TCGACGCTAC CCGCGTTGCG
CTGGGTGGCG CTCCGGCCGA AGCCAATGCC GAGCGTTACA TGGCGCTGCT ACAGGCAAAC
TTTGCCGAGT TCCCGGATGA CCTGGCGCAA ATGCGCGAAC AGGGCCTCGC ATATTTCCGC
TACTTCGCCA CCGAGAAAGG CCTGGCCGCA CGCGACCAGG AAGGCCGCCC GACCACCCTG
CAAGGCTTGA TCGACGCGGG CCACGTGCAC TTCGAGGCGC TGGTGTACGA GGACTTCCTG
CCGGTGAGTG CGGCGGGGAT CTTCCAATCC AACCTGGGCG ACGATGCGCA GGCCGAATAC
GGCAGCAACG CCAACCGCGA AGCGTTCGAA GCGGCGCTGG GGTTGCAGGT ACAGGATGAG
CTGGCGCTGT ATGCGCAAAG CGAGCGCCGG TCGCTGCAGG CCTGTGCACA GGCGTTGAAC
CTGGGTTCGA TGTAA
 
Protein sequence
MPANDFVSPD SIRAQFSAAM SLMYKQEVPL YGTLLELVSE INQQVMAQQP EVAEALRWTG 
EIERLDQERH GAIRVGTAEE LATIARLFAV MGMQPVGYYD LSSAGVPVHS TAFRAVHEQS
LHVSPFRVFT SLLRLELIDN PQLRELAQSI LAKRQIFTSR ALELIAQCER EGGLDAADAE
TFVQEALHTF RWHQDATVTA EQYQQLHDQH RLIADVVAFK GPHINHLTPR TLDIDAIQLG
MPAKGIPPKA VVEGPPTRRH PILLRQTSFK ALQETVAFRD QQGREGSHTA RFGEIEQRGA
ALTPKGRQLY DKLLDATRVA LGGAPAEANA ERYMALLQAN FAEFPDDLAQ MREQGLAYFR
YFATEKGLAA RDQEGRPTTL QGLIDAGHVH FEALVYEDFL PVSAAGIFQS NLGDDAQAEY
GSNANREAFE AALGLQVQDE LALYAQSERR SLQACAQALN LGSM