| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5258 |
|---|
| Symbol | |
|---|
| ID | 1042337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 6002437 |
|---|
| End bp | 6003927 |
|---|
| Gene Length | 1491 bp |
|---|
| Protein Length | 496 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637148657 |
|---|
| Product | aldehyde dehydrogenase family protein |
|---|
| Protein accession | NP_747359 |
|---|
| Protein GI | 26991934 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0956812 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGCTG GATTGCTCGA GCGCCTTGGC GTTGCCGCCG AGGCTTACAC CCAGGGCGAC
TACCCTGTTC ACACGCCGAT CGACGGCAGC CAGATCGCCT CGGTGAAACT GCTCGGCAAG
GCCGAGACCA TCGCCCGCAT CGATCAGGCC CAGAGCGCCT TCGAAGCCTG GCGCAGTGTG
CCGGCTCCGC GCCGTGGCGA ACTGGTGCGC CTGTTCGGCG AAGTGCTGCG TGAGCACAAG
GCCGACCTCG GCGAGCTGGT CTCGATCGAA GCCGGCAAGA TCACCCAGGA AGGCCTGGGT
GAAGTGCAGG AAATGATCGA CATCTGCGAC TTCGCCGTTG GCCTGTCGCG CCAGCTGTAC
GGCCTGACCA TCGCTTCCGA GCGCCCGGGC CACCACATGC GTGAAACCTG GCACCCGCTG
GGTGTGGTCG GCGTGATCAG CGCCTTCAAC TTCCCGGTTG CCGTGTGGGC CTGGAACACC
GCCCTGGCCC TGGTGGCCGG CAACTCGGTG GTATGGAAAC CGTCCGAGAA GACTCCGCTG
ACCGCCCTGG CCTGCCAGGC GTTGTTCGAA AAAGCCCTGA AAGCCTTCGG CGATGCTCCG
GCTGGCTTGG CACAACTGGT GATCGGCGGC CGTGAAGCTG GCGAAGCCAT GGTCGACGAC
CCGCGCGTAC CGCTGGTCAG CGCCACCGGC AGCACCCGCA TGGGTCGCGA AGTCGGCCCA
CGCGTTGCTG CCCGCTTCGG CCGCAGCATC CTGGAACTGG GCGGCAACAA CGCCATGATC
CTGGCCCCGA GCGCCGACCT GGACCTGGCC GTGCGCGGCA TCCTGTTCTC GGCTGTCGGC
ACTGCCGGCC AGCGTTGCAC CACCCTGCGC CGCCTGATCG TGCACCGTTC GATCAAGGAC
GAAGTGGTTG CCCGCGTCAA AGCCGCCTAC GGCAAAGTGC GCATCGGCGA CCCACGTAAA
GACAACCTGG TCGGCCCGCT GATCGACAAG CAGTCGTTCG ACGCCATGCA GGGCGCACTG
GCCAAGGCCC GCGACGAAGG TGGCCAGGTA TTCGGTGGCG AGCGTCAGCT GGCCGACCAG
TACCCGAACG CCTACTACGT TTCGCCAGCC ATTGCTGAAA TGCCGGCGCA AAGTGACGTG
GTGCGCCACG AAACCTTCGC ACCGATCCTG TACGTGCTGG CCTACGACGA CTTCGAGGAG
GCCCTGCGCC TGAACAACGA AGTGCCACAA GGTCTGTCGT CGTGCATTTT CACCACCGAC
ATCCGTGAAG CCGAGCGCTT CCAGAGCGCC TCGGGCAGCG ACTGCGGCAT CGCCAACGTC
AACATCGGTA CCAGCGGCGC CGAGATTGGT GGTGCGTTTG GTGGCGAGAA GGAAACCGGC
GGTGGCCGTG AGTCGGGCTC GGATGCCTGG AAAGGCTACA TGCGTCGCCA GACCAACACC
GTGAACTACT CGCGCGAGCT GCCGCTGGCG CAGGGTATCG TGTTCGACTG A
|
|---|
| Protein sequence | MVAGLLERLG VAAEAYTQGD YPVHTPIDGS QIASVKLLGK AETIARIDQA QSAFEAWRSV
PAPRRGELVR LFGEVLREHK ADLGELVSIE AGKITQEGLG EVQEMIDICD FAVGLSRQLY
GLTIASERPG HHMRETWHPL GVVGVISAFN FPVAVWAWNT ALALVAGNSV VWKPSEKTPL
TALACQALFE KALKAFGDAP AGLAQLVIGG REAGEAMVDD PRVPLVSATG STRMGREVGP
RVAARFGRSI LELGGNNAMI LAPSADLDLA VRGILFSAVG TAGQRCTTLR RLIVHRSIKD
EVVARVKAAY GKVRIGDPRK DNLVGPLIDK QSFDAMQGAL AKARDEGGQV FGGERQLADQ
YPNAYYVSPA IAEMPAQSDV VRHETFAPIL YVLAYDDFEE ALRLNNEVPQ GLSSCIFTTD
IREAERFQSA SGSDCGIANV NIGTSGAEIG GAFGGEKETG GGRESGSDAW KGYMRRQTNT
VNYSRELPLA QGIVFD
|
|---|
| |