| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5251 |
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| Symbol | |
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| ID | 1042336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 5993265 |
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| End bp | 5994863 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637148650 |
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| Product | transporter, putative |
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| Protein accession | NP_747352 |
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| Protein GI | 26991927 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACAT CACCTTCAGG TGCCTGGAGC CCGTTGCGTA ACACCACCTT CCGCATGCTG
TGGATCGCCA CCATCGCCTC CAACATCGGC ACCTGGATGC ACGAGGTGGG CGCCGGCTGG
CTGATGACCA CGCTGTCGGC CAGCCCGCTG CACGTGGCGT TGATCCAGGT AGCCGGCTCG
CTGCCGATGT TCTTCCTGGC CCTGCCGGCT GGCGCAGCGG CGGACATCGT CGACAAACGC
CGCTACCTGT TGCTGGTGCA GCTGTGGATG TCTTGCGTAG CGGTTGTGCT GGCGGCCCTG
ACCTTGCTCG GGATGATGAA CGTCACCTCG CTGCTGGTGC TGACCCTGGC ACTGGGCATT
GGTACAGCGC TGATGATGCC GGCGTGGAGC GCACTGACAC CGGAACTGGT GCGCAAGGAG
GACCTGGCCA ACGCGGTGGC GCTCTCCAGT GTCGGCATCA ACGTGTCACG GGCCATCGGC
CCGGCACTGG CGGGGGTGGT GGTGAGCATG GTCGGCCCGT GGCTGACCTT TGCCCTGAAT
GCCATCTCGT TCGCGGGTGT GATCCTGGTG TTGTTCCTGT GGAAGCGCGA GGTGAAGGAA
CCACTGCTGC CGGCCGAACG CTTCGTTGGC GCCATGCGCA CTGGGCTGCG CTTTGCCCGC
AGCGCCAAGC CTTTGCAGGC CGTGATGCTA CGCGCGTTGG CGTTCTTTTT CTGCGCCAGC
GCCGGTACTT CGCTGCTGCC GCTGATCGTG CGTGGCGAGA TGCGCGGCAC CGCAGCGGAC
TTCGGCCTGC TGCTGGCGGC CATCGGTATT GGCGCAGTGG CGGGTGCCAC CTTGCTGCCG
CGCCTGCGCG AGCGCATCAG CCGTGACCGG CTGGTGTTAC TGGCCAGCCT GTTGTATGCC
CTGTTCCTGC TGGCCCTGGC GTTGGTGCGC AATTTCTATG CGCTGCTGCC CGCGATGCTG
CTCAGTGGCG CGGCGTGGAT CGCGGTGCTG TCCAACCTGC AAGTGGCTGC ACAGACTTCG
GTGCCAGCCT GGGTACGGGC GCGGGCTTTG TCGGTATACA TTCTGATTTT CTTCGGCGCC
ATGGCCTGTG GTGGCCTGCT GTGGGGCACG CTGGCCAGCC ATGCAACGCT CACCTTCAGC
CTGCTGGTGG CCGCAGGCGG CCTGGCGCTG GGTACCTTGC TGACCTGCAA GGTGGCGCTG
CCGGAAACCG AGGCAGAAGA GCTGACGCCG TCGCTGCATT GGCCGGTGCC GGTGTTGAGC
GATGACATGG ACAAGGAAGC CGGACCGGTG ATGGTCACCG TCGAGTACCA CATCGCCCCC
ACCAAGGCCG AGGCCTTCCA GCAGGCGGCG CGGGAGCTGG AAGCGATGCG CAAGCGCAAT
GGCGCATTGT CGTGGGGGTT GATGCGGGAC AGTGCTGATC CGGCGTTGTG GCTGGAGTTC
TTCTTCGAGG AATCGTGGCT GGAGCATCTG CGACATCACC ACCGGGTGAC CCGTGGTGAA
CTGAAGATCG AGGCGCGGGT CAGGATGCTG CAGACCGATG GGGTTGAGGT GCGGATTCGG
CATCTATTGG CTGGTGGGGA GCATAAGGCA CACCATTGA
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| Protein sequence | MSTSPSGAWS PLRNTTFRML WIATIASNIG TWMHEVGAGW LMTTLSASPL HVALIQVAGS
LPMFFLALPA GAAADIVDKR RYLLLVQLWM SCVAVVLAAL TLLGMMNVTS LLVLTLALGI
GTALMMPAWS ALTPELVRKE DLANAVALSS VGINVSRAIG PALAGVVVSM VGPWLTFALN
AISFAGVILV LFLWKREVKE PLLPAERFVG AMRTGLRFAR SAKPLQAVML RALAFFFCAS
AGTSLLPLIV RGEMRGTAAD FGLLLAAIGI GAVAGATLLP RLRERISRDR LVLLASLLYA
LFLLALALVR NFYALLPAML LSGAAWIAVL SNLQVAAQTS VPAWVRARAL SVYILIFFGA
MACGGLLWGT LASHATLTFS LLVAAGGLAL GTLLTCKVAL PETEAEELTP SLHWPVPVLS
DDMDKEAGPV MVTVEYHIAP TKAEAFQQAA RELEAMRKRN GALSWGLMRD SADPALWLEF
FFEESWLEHL RHHHRVTRGE LKIEARVRML QTDGVEVRIR HLLAGGEHKA HH
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