Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5250 |
Symbol | |
ID | 1044766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5992001 |
End bp | 5993263 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637148649 |
Product | porin, putative |
Protein accession | NP_747351 |
Protein GI | 26991926 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGCG CCACACACGG ACCAGGCCGC GCCCTGCTCG CCACCCTCGC CCTCTGGCCG GCGCTGAGCC ACGCCGAAGC GCCCGGCTGG TCGCTGCTCA GCCGCAACTA TTTCCTGCAC AGTGACTTCC GCTCGCCCTC CGGCAGCGGC CAGAACTATC GCCAGGAATG GGCCCAAGGC TTCATCGGCG AGGTGCGTTC CGGTTTCACC GAAGGCACTG TCGGCGTCGG CATCGATGCC CATGGCTTTC TTGGCCTCAA GCTCGACGGC GGCCGCGGCC ATAGCGGCAC CGGCCTGCTG CCACGCGACA GCGATGGCCG CGCCGAGTCC GAGTACTCCA GCGCCGGTGC CGCGCTCAAA ATGCAGTTAG GCAACACCCA ACTGCGCTAT GGCGAGATGA TGGTGGAAAC CCCGGTGTTC GACACCGGTG ACAAACGCCT GCACCCGGAA TACGCCACCG GCTGGTGGGT GGAAAACACC GACCAGCCCG ACTGGCGCCT GCAGGCCGGG CGTTTCACTG CCTTCAACAA CCAGGACAAC AGCTCCACCC ACGACGACTT CAGCGGCTAC GGCGCGACCA CCCACAACCG GGCCATCAGC CTGGCCGGTG CCACCTTCGC ACCCAACGGG CCGTTCGGCG CCGCACTGTA TGCCGGGCAA CTGGAAAACA CCTGGCGCCA GGCCTACCTC AACCTGAACC TGGCCCAAGG CAACTGGCGC CTGGACGGCA ACCTGTACAA AACCCGCGAT ACCGGCAACG CCAGCGCCGG GGCGATCGAC ACCCTCGCTT ACAGCCTGCT GGCCAAGTAC AGCTTCGGCG CCCAGGCGCT GAGCGTGGCC TACCAGAAGG TCGAGGGCGA CACCCCGTTC GACTTCGTCG GCGGCGACTC CATCTACCTG GCCAACGCGA TCAAGTACGC CGACTTCAAC GGCCCTGGCG AGCACTCGTG GCAACTGCGC TATGACCTGA ACTTCGCCAC CCTCGGTGCA CCTGGCCTGA GCCTGATGGG CCGCTATGTC AGCGGCCGCG GCATCGACGG CAGCCATGCG CCTGCGGGCG GCGCCTATGT GAACCAGTAC GGCGACGGCG GCAAGCACTG GGAACGCGAC ATCGACCTGA AATACGTGGT GCAGTCGGGG GCAGCCAAGG ACCTGAGCCT GTCGTTCTCC CACGTCAGCC ACCGCGCCAA CCAGGCCCAG GCGGGCGATG ATATCGACCG CATCTACCTG ATCATCGAAT ACCCACTCAA AGGCAGCTTC TGA
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Protein sequence | MIRATHGPGR ALLATLALWP ALSHAEAPGW SLLSRNYFLH SDFRSPSGSG QNYRQEWAQG FIGEVRSGFT EGTVGVGIDA HGFLGLKLDG GRGHSGTGLL PRDSDGRAES EYSSAGAALK MQLGNTQLRY GEMMVETPVF DTGDKRLHPE YATGWWVENT DQPDWRLQAG RFTAFNNQDN SSTHDDFSGY GATTHNRAIS LAGATFAPNG PFGAALYAGQ LENTWRQAYL NLNLAQGNWR LDGNLYKTRD TGNASAGAID TLAYSLLAKY SFGAQALSVA YQKVEGDTPF DFVGGDSIYL ANAIKYADFN GPGEHSWQLR YDLNFATLGA PGLSLMGRYV SGRGIDGSHA PAGGAYVNQY GDGGKHWERD IDLKYVVQSG AAKDLSLSFS HVSHRANQAQ AGDDIDRIYL IIEYPLKGSF
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