Gene PP_5246 details

Gene Information

• Locus tag: PP_5246
• Symbol: kefB
• ID: 1042351
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas putida KT2440
• Kingdom: Bacteria
• Replicon accession: NC_002947
• Strand: +
• Start bp: 5986910
• End bp: 5988697
• Gene Length: 1788 bp
• Protein Length: 595 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637148645
• Product: potassium efflux system protein
• Protein accession: NP_747347
• Protein GI: 26991922
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG0475] Kef-type K+ transport systems, membrane components; [COG0569] K+ transport systems, NAD-binding component
• TIGRFAM ID: [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 25
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCACACG AAGGCAGCCT TCTGCAAACC GCGGTGATCT TCCTGCTTGC CGCCGTCCTC 
GCCGTCCCCC TGGCCAAGCG CCTGCAACTC GGTGCCGTGC TCGGCTACCT GCTCGCCGGT 
GTGGTCATCG GCCCGCAAGC ACTTGGCCTG ATCCGCGACA CAGAAAGCGT GGCGCACATT 
TCCGAACTGG GCGTGGTCTT GCTGCTGTTC ATCATCGGCC TGGAACTGTC GCCCAAACGC 
TTGTGGCTGA TGCGCAAGTC GGTGTTTGGT GTCGGCACTG CCCAAGTGGT GCTGACCGGC 
GCAGTCATCG GCGCCATCGC CCTGTTCGGC TTCAGCCAGA CGCTACCAGC AGCCATCGTG 
CTCGGTCTGG GCCTGGCGCT TTCGTCCACC GCCCTTGGCC TGCAGAGCCT GGCCGAGAGC 
AAGCAGCTCA ATGCACCGCA CGGCCGTCTG GCATTCGCCA TCCTGTTGTT CCAGGACATC 
GCCGCGATCC CGCTGATCGC CTTGGTACCG CTGCTGGCCG CCAGTGGCCC AGACACCAGC 
CAAGGCGACA GCCTGCAACA CGGCCTGAAG GTATTCGCCA GCATCGCCGT GGTGATCATC 
GGCGGTCGCT ACCTGTTGCG CCCGGTGTTC CGCACCGTGG CCCGCACGGG CCTGCCGGAA 
GTGTCTACTG CCACCGCACT GCTGGTAGTG ATCGGCACCG CCTGGCTGAT GGAAGAAGCG 
GGTATCTCCA TGGCCCTTGG CGCTTTCCTC GCCGGCCTGC TGCTGGCCGA CTCGGAATAC 
CGTCACGAGC TGGAATCGCA GATCGAACCC TTCAAGGGCC TGCTGCTGGG GCTGTTCTTC 
ATCAGCGTGG GCATGGGCGC CAACCTGCGC CTGCTGCTGG AAATGCCACT GGTGGTGCTG 
GGCCTGACCC TGTTGCTGGT GGCCGTGAAG CTGCTGTTGC TGATAGGCGT CGGCCGCTTG 
GTCGGCGGCC TGAACAGCGC CAGCGCCCTG CGCCTGGGCA TGGTGCTGGC GGCCGGTGGC 
GAGTTCGCCT TCGTGGTGTT CAAGCTGGGC AAGGACCAAG GCCTGTTCGA TACCCAGACC 
TACGACCTGC TGCTGATGAC CATTACCCTG TCAATGGCCA TCACCCCGCT GCTGATGCTG 
GGTTGCGCCC GCGCCCTCAA ACGCCCGCAA CCGGCGCGTG AAGTGCCCGA GCAGTACAAG 
CAGATCCAGA CGGATACACC GCGGGTGGTG ATCGTCGGCA TGGGCCGCAT GGGCCAGATC 
GTCGCGCGCA TCCTGCGGGC ACAGAAGATC CCGTTCATTG CCCTGGAAAC CTCGGTGGAC 
ACCATCGAGA TGACCCGCAT GTTCGAACAG GTGCCGGTGT TCTACGGCGA CCCGCTGCGC 
CCGGAGGTGT TGCACGCCGC CAAGGTGGGT GAAGCGGAGT ATTTCATCAT CACCATTGAT 
GACCCTGAAG CCGCCATTCA TACCGCCGCA CGGGTGAAGC GTCTGTACCC TCACCTGAAG 
GTGCTGGCCC GGGCGCGTAA CCGCCAGCAT GTGCACAAAT TGGCGGATGT GGGCGCCGAG 
CCGATTCGCG AGACGTTCTA CTCCAGCCTG GAAATGACCC GCCGGGCACT GGTGGGGTTG 
GGCCTGAGCG ATGAACAGGC GGCGGACCGC ATTGCACGGT TTACCCAGCA TGACGAAGAG 
GTGCTGGAGG CCCAGGGGCA AGTGCGTGAT GACCGGGCCA AGGTGATGCA GACGGCCAAG 
GAGGCGCGGG TGGAGCTGGA GCGGTTGTTT GATTCGGATG CGGACTGA 

 

Protein sequence

MPHEGSLLQT AVIFLLAAVL AVPLAKRLQL GAVLGYLLAG VVIGPQALGL IRDTESVAHI 
SELGVVLLLF IIGLELSPKR LWLMRKSVFG VGTAQVVLTG AVIGAIALFG FSQTLPAAIV 
LGLGLALSST ALGLQSLAES KQLNAPHGRL AFAILLFQDI AAIPLIALVP LLAASGPDTS 
QGDSLQHGLK VFASIAVVII GGRYLLRPVF RTVARTGLPE VSTATALLVV IGTAWLMEEA 
GISMALGAFL AGLLLADSEY RHELESQIEP FKGLLLGLFF ISVGMGANLR LLLEMPLVVL 
GLTLLLVAVK LLLLIGVGRL VGGLNSASAL RLGMVLAAGG EFAFVVFKLG KDQGLFDTQT 
YDLLLMTITL SMAITPLLML GCARALKRPQ PAREVPEQYK QIQTDTPRVV IVGMGRMGQI 
VARILRAQKI PFIALETSVD TIEMTRMFEQ VPVFYGDPLR PEVLHAAKVG EAEYFIITID 
DPEAAIHTAA RVKRLYPHLK VLARARNRQH VHKLADVGAE PIRETFYSSL EMTRRALVGL 
GLSDEQAADR IARFTQHDEE VLEAQGQVRD DRAKVMQTAK EARVELERLF DSDAD