| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5242 |
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| Symbol | |
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| ID | 1042342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 5979347 |
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| End bp | 5984395 |
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| Gene Length | 5049 bp |
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| Protein Length | 1682 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637148641 |
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| Product | sensor histidine kinase/GAF domain-containing protein |
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| Protein accession | NP_747343 |
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| Protein GI | 26991918 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase
[COG2205] Osmosensitive K+ channel histidine kinase
[COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.59114 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGATG AACGCCTTGC CCACAGGCCC ATCGATTACG ACCAGTCAAT CGACGAGGGC
TGGCTGAAGC GGTGCGAGGT CAGCGCGCTG GGCCAGGAAG GTGAACTCAG CTATTTCCGC
CTGCGCGACC CAGCCACAAA TCAGGCCTGG ATCGCCGTGC GCGCGCCGCT CGAGGCCCCT
TCCGCCTGTC AGCGCCTGGA ACGTGACTAC CGCCTGCAAC TGGACCCGCA GTGGGCGGTG
ATCCCCTCGG CGTTCGTGCG CTCGGCCGAA GGCCCGTTGC TGGTGTACCC GGCCGGGCGC
TCAGTCGCCG ACCTGATCGC TGAAGGCCCT GCTGCACTGG AGCCGTTTCT CGACATCGCG
GTGAACGCTG CCCATGCGTT GGCGCAAGCG CACGAACGCA ATGTGCTGCA CGGTACATTG
CAGCCTGAAC ATGTGTACCT GCGCGCCCAC CAGCGGGTGC GCCTGGGCTT CTTTCGTGCC
GACCCAGCAG AGCGGATCAG CGAACAGGGC ACCCCGCTCG GCAACTGGGC CTACCTGGCG
CCGGAGCAGG TTTGCCCGCA CGGTAGCAGC AGCGACCGAC GCAGTGACAT CTATGCCCTG
GGGGCAATCC TCTACCAGTT ACTGGTAGGC GAACTGCCGC TGGCCGGGCG CGACACCCTG
CACTGGCGAC AGCTGCATGC TGGTGTGCAG CCGCGGGCGG CCAGCGAAGC GGACAGCAAG
GTGCCGCACT CCCTCAGCCT GGTCCTGGCA AAGGCCTTGG CCAAAGAGCC GGACGCCCGC
TACCAGAGCG CGCGCGCCTT TGCAGTGGAC TTGGCTCACT GCCAGCGGCA GTGGGCCGCC
CACAAAACCA TGGCACCCTT CACCCCAGGC TGCGCCGACC CGGTAGCGCC CGGCCACGCG
CGCCTGTTTG GCCGCGGCGC CGAGCAAAAG GCTATCACCC TGCTGCTCAA GGCCTTGAAT
CGCGATAGCA AACCACAAGC CCTGGTCATC AACGGCGCTG CTGGCATGGG CAAGTCGAGC
CTGGTCGAAG CCGCTCTCAA GGCCAACGCC GAAGGTTACT GGGCCGTCGG CAAATGCAAC
AGCCACACCC AAGCAGTGCC CTACACGCCC TGGATCGAAA TACTCAGTGC CCTGACTACC
CAGTTGCTGG CCAAGAATAG TCAGGACCTC GTCACCCTGC GCCGCGAAAT CCAGCGCCGC
ATCAAAAGTC ATGGTCGTCT GCTCGGCAAA CTGGCCCCGG ACCTGCAACT GATTCTCGGC
CCCCTGCCCC AATTACCCGC CAAGCCCACG CGCCTTGCGT TGCAGAAGGA ACTGCACGCG
ATCATTGAAT TCCTGCAGGT TTTCAGCCGG CCTGGCCAAC CGCTGGTGCT GTTCTTCGAC
GACCTGCAAT GGGCCGACGA CGCCACCCGG CAACTGTTGG CCCAACTGCT GGCTGAAGCG
CCGGCCAACC TGCTGCTGAT TTTCACCCGG TGCAACGATA CGCCCACCAC CAGCGCACCG
CTGGCCATAC CCGCAGCGGT GCGCAGCACC ACGCTGAACC TGCGGCCGCT GGCCGTTGGG
GCGGTGGCCG AGCTGATTGG CGAGCGCTTC CATGTTGCCC CCGAGGCCGC ATTTCAACTG
GCCGAACGGG TGCATGGCAA GACGGCGGGC AACCCGTTTT TCATCAACCA GATCCTCAGG
GCCATGGTCG AAGACCAGCT GTTCATCTTC GACACCCAGG CCATGCGCTG GTCTTGGTGC
CTGCAGGCCG TGGCCCGGCA CTGCTACTCC GACAATGTCG CCGACCTGAT GGTCCACCGT
CTGGAGCGCC TGCCGGCACC GCAACGCGAC CTGTTGCGGG TCGTCAGCGC GGCGGGCAGC
CACTGCGATG AACACCTGCT TCGGCAAGTG CTCGCCCAAC CGCCAGGCGA ACCCTTGAAA
GCCTTGATTG GCGCTGGCTT CCTGCAACCG GGCCAGAACG GCTTGGGCTT CACTCATGAC
CGGGTGATGG AGGCCGCTTA TGCACTCACG CCCGTGCACC AGCGCGCCTC GCTGCATGCA
CGTATCGCCC TGGCCATGCG CCAGGCTTGG CCAGGGCGAA CGCACGAGGT GTTGTTCGAG
CTCGCCAGCC AGCTACAACG CGCCAGCCCC TGCGGGTTTG CAGCGGATGA CTGCGAAGCG
TTCCTGCAGC TTTTACGCGA AGCCGCATCA TGCGCACGCG ACGCGGGCAC CTTCGAGCAG
GCCGCTGGTT ACCTGCACAC CGCCGAGCAG TTGCTGCAGC ACAGCGCCAC GCTGGAAAGC
CGCGCCACGC ATGGCTTTGC CATCGCCTGC ATGGCGACGG AGTGCGACAT GCAACTGTCA
CGCACGATCG CGGCCGAGGC CCGCCTCACT GAATGCCGCC AGCGTGCTCG CTCGGTGTTG
GACCAGGCAC GGGCGTGCCG GCTGCAGGCG CTGCTGTACA CCTTGCGCGG TGACTATCAG
GCGGCCATCG ACAGCGCCCT GGCCGGCCTG GACTTACTGG GTATCAGCCC GGTGCGGGGC
CTCGACTGGC AGCAGGTCGA GGCCAGTCAT GCCCATGTGC AGGCGTTGAT CGAACAGAAG
GACCGGCATT GCCTGGAGTC ACTGCCGCGC ACCGACTCGG AGGAAGTGAC GGTTGCCATC
AGCCTGCTGG CCACTCTGTC ATCATCCTTC TTCGTGAAGG ACGACATCAG CTTCCTGCAC
CTGGCCAAGC TCATGGAGTT GTCGCTACTG CACGGCGTTG CCCCTGGCAG CACCTACGGC
ATGGCCTGGT ACGGCGTGAT GATTGCCGAG CGTTTTGGCG CTTACCATGA TGGCCATGCC
TGTTGCCTGG CCGCGCTCAA GCTGATCGAA CGGCACGGTT TCGACGCTGA TCTGACCAGC
GCGCTGCTGG CCCTGGATCA GGTCAGCGCC TGGACCTCGC CCATGGAATT CGCCCGACGT
ACCGCGCTGG ACGCGGTCGA CTCGGCGCGC CTGAGCGGTG ACCTGGCGAT GAGCTGCTAT
GCCTGCAACC ACCTGGTTTC AGATTCGCTG TTCATGGGCC GCTACCTGCC GGACGTGGTC
GAGGAGGTGG CGCAAGGCCT GGCCACTGTA CGTCGCCACG GCTACGGCGA TATCGAGCAG
ATCCTGCTGG CACAGCAAGC GTTCGTCGCC AACCTGAGCG GCACGCCCTG CCCCGCCCCG
GCCACCGCCT CGAAGTCGCC CACCACGCGG TTCTTCCAAC ACCTGTTCGC CGCCATGTGC
GCCTTCTACA TGGGCAATAT CCCAAAGACC ATGCGCGACC TGGCATTGGC CGGCGACAAC
ACCTGGGCCG CACCGGCGCA CATCAACCTG GCCGACTATC ACCTGTTCCG CGGCCTGGCC
CTGGGCAGCC CCGAGGCCCA CGGCAGCCTT GCCGACAAGC TGCGCGAGCT GCAGGCCCTG
CGCGAGCGAT TCAGCCGCTG GGCCGGCTTC AACCCGGCCA CCTTCCGCAG CAAGCAGTTG
CTAATCGAGG GCGTGATCGC CAAGCTCGAA GGCGACGGCC TGGCCGCGAT CCGCTGCTTC
GACCAGGCGC AAATCGCCGC CACCGCTGCC GGCTTCATCC ACGAGCAGGC GCTGGCCCAT
GAACAGCTGG CCGAGGTGTG CATCCCCAGC GGCCTGATCT CGGGCGCCAA CCTGCACCTG
CGCATTGCCC GCGACTGCTT CCACATCTGG GGCGCGACCG GCAAGGTGCA CCAGTTGGAG
ACGTTGCATC CGTTTTTGCG TACCCAGCCG ATTCAGGAGA CCTATCGCGC CACCCACCAG
GCCAGGCTGG ACCTCGAAGC CGGCATCGAA GCCGCGCGGG CGCTGTCCGA AGAAGTGCTG
CTCGAAGGCC TGATCGAAAC CCTGATGGGC CACCTGACCC AGCACTCCGG TGCCGACCAT
GGCGCGCTGC TGATTGTAAG CGGCGCCGAA TTCCAGATGG CCGCCCTGGC CTACATCGAC
GATGCCGGGC TGCACGTGAG CATGGACAAC TGCCAGAAGT TCATGACCCA GGCACCGTTG
TCGGTCATCA ACACCACCAT GCGCACCCGC AAACCGCTGG TGCTCAACGA TGCCCTCAGT
GAGTGCCCGG AGGCCTTCCG CCAACAGCTG CAGGCGCGCA ACGCCCGCTC GGTGCTGTGC
CTGCCGCTGG TGATCCAGGG CGTGCTGATC GGCCTGGTGT ACCTGGAAAA CCGCCTCGTG
CCCAACCTGT TCGGCAGTCA GCGCCTGGCC ATGCTGGAAA TCCTCGCCTC GCAGGCAGCG
GTGTCGCTAC AAACGGCCAA GTTCTACACG CGCCTGGCCG AGGAAAACCA GATCCGCACC
CAGATGGAGG CCGAGTTGCG CCGCTCGCGT GCGGAACTGG CGCGCAGTGC GCACTTGCAG
GCGATGAATG AGCTGTCAGC GTCCATCGCC CACGAGATCA GCCAGCCGCT CCTGGGCATC
GCCTCCAATG CCGCGGCCAG CCTGCGCTGG CTCAAACGCG CCAAACCCGA CCTGGAAGAA
GCGATTGCCG GCCTGGAAGA CATCCGCAAC GACAGCGAAC GGGCCGGCAA CATCGTGCGG
GCGCTGCGGT CCCTGGCCAA GCAGTCACCG ATGCAACTCA AGGCGGTGAA GCTGGACGAA
TTGATCCGCG AGGTGGTGCG CCTGACCTCG GCCGACGCCG CCAAGGGCAA GGTGGATGTG
CAGACACGGC TGAAGGCCGG GGTGTGCGTG ACAGCCGACC CGGTGCAGTT GCAGCAGCTG
GTGTTCAACC TGATTACCAA TGCCCTGGAA GCGTTGGCGG GGTATCGCTG TGACGGGGTG
CTGAAGATTA CGTCGGCGGT AGTCGAGGAC GAGGTGGAGA TCTGCGTGGA CGACAACGGG
CCGGGGATCG CGGCGGACGA GCGTGAGCGC GTATTCGATG CGTTTCATAC CACCAAGACC
GGTGGCATGG GGATGGGCTT GGCGATCTGT AGTTCGGTGG CTCAGGCCCA CGGCGGGCAG
CTGCAGGCGC TGGTGTCGCA GTTGGGTGGA TGCCGGATTC GTGTCAGTCT GCCTTTGAAT
CACGCATAG
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| Protein sequence | MLDERLAHRP IDYDQSIDEG WLKRCEVSAL GQEGELSYFR LRDPATNQAW IAVRAPLEAP
SACQRLERDY RLQLDPQWAV IPSAFVRSAE GPLLVYPAGR SVADLIAEGP AALEPFLDIA
VNAAHALAQA HERNVLHGTL QPEHVYLRAH QRVRLGFFRA DPAERISEQG TPLGNWAYLA
PEQVCPHGSS SDRRSDIYAL GAILYQLLVG ELPLAGRDTL HWRQLHAGVQ PRAASEADSK
VPHSLSLVLA KALAKEPDAR YQSARAFAVD LAHCQRQWAA HKTMAPFTPG CADPVAPGHA
RLFGRGAEQK AITLLLKALN RDSKPQALVI NGAAGMGKSS LVEAALKANA EGYWAVGKCN
SHTQAVPYTP WIEILSALTT QLLAKNSQDL VTLRREIQRR IKSHGRLLGK LAPDLQLILG
PLPQLPAKPT RLALQKELHA IIEFLQVFSR PGQPLVLFFD DLQWADDATR QLLAQLLAEA
PANLLLIFTR CNDTPTTSAP LAIPAAVRST TLNLRPLAVG AVAELIGERF HVAPEAAFQL
AERVHGKTAG NPFFINQILR AMVEDQLFIF DTQAMRWSWC LQAVARHCYS DNVADLMVHR
LERLPAPQRD LLRVVSAAGS HCDEHLLRQV LAQPPGEPLK ALIGAGFLQP GQNGLGFTHD
RVMEAAYALT PVHQRASLHA RIALAMRQAW PGRTHEVLFE LASQLQRASP CGFAADDCEA
FLQLLREAAS CARDAGTFEQ AAGYLHTAEQ LLQHSATLES RATHGFAIAC MATECDMQLS
RTIAAEARLT ECRQRARSVL DQARACRLQA LLYTLRGDYQ AAIDSALAGL DLLGISPVRG
LDWQQVEASH AHVQALIEQK DRHCLESLPR TDSEEVTVAI SLLATLSSSF FVKDDISFLH
LAKLMELSLL HGVAPGSTYG MAWYGVMIAE RFGAYHDGHA CCLAALKLIE RHGFDADLTS
ALLALDQVSA WTSPMEFARR TALDAVDSAR LSGDLAMSCY ACNHLVSDSL FMGRYLPDVV
EEVAQGLATV RRHGYGDIEQ ILLAQQAFVA NLSGTPCPAP ATASKSPTTR FFQHLFAAMC
AFYMGNIPKT MRDLALAGDN TWAAPAHINL ADYHLFRGLA LGSPEAHGSL ADKLRELQAL
RERFSRWAGF NPATFRSKQL LIEGVIAKLE GDGLAAIRCF DQAQIAATAA GFIHEQALAH
EQLAEVCIPS GLISGANLHL RIARDCFHIW GATGKVHQLE TLHPFLRTQP IQETYRATHQ
ARLDLEAGIE AARALSEEVL LEGLIETLMG HLTQHSGADH GALLIVSGAE FQMAALAYID
DAGLHVSMDN CQKFMTQAPL SVINTTMRTR KPLVLNDALS ECPEAFRQQL QARNARSVLC
LPLVIQGVLI GLVYLENRLV PNLFGSQRLA MLEILASQAA VSLQTAKFYT RLAEENQIRT
QMEAELRRSR AELARSAHLQ AMNELSASIA HEISQPLLGI ASNAAASLRW LKRAKPDLEE
AIAGLEDIRN DSERAGNIVR ALRSLAKQSP MQLKAVKLDE LIREVVRLTS ADAAKGKVDV
QTRLKAGVCV TADPVQLQQL VFNLITNALE ALAGYRCDGV LKITSAVVED EVEICVDDNG
PGIAADERER VFDAFHTTKT GGMGMGLAIC SSVAQAHGGQ LQALVSQLGG CRIRVSLPLN
HA
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