| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5231 |
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| Symbol | |
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| ID | 1042363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 5964798 |
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| End bp | 5965493 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637148630 |
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| Product | HAD superfamily hydrolase |
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| Protein accession | NP_747332 |
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| Protein GI | 26991907 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCA AGCTGATCAC CTTCGACCTC GACGATACCC TGTGGGACAC CGCGCCGGTG
ATTGCCACCG CGGAAGTCGT GCTGCGCGAC TGGCTCGAGG CCAACGCACC AACCCTCGGC
AGCGTGCCGG TGGAACACCT GTTCGCCATC CGCGAGCGCC TGGTGCAAGC AGAGCCCGGC
CTCAAGCACC GCATCAGCGC CCTGCGCAGG CGCGTGCTGT TTCATGCCCT GGAAGAGGTC
GGCTACAGCG AACAGCACGC ACAGGCGCTG GCCAACGAAG GCTTCGAAGT GTTCCTGCAT
GCCCGCCACC AGGTGGAGAT CTTCCCAGAG GTGCAGCCGG TGCTTGAAAT CTTGCGCCAT
CAATACATCC TGGGGGTGGT CACCAACGGC AATGCCGACG TCAGCCGGCT GGGGTTGGCC
GATTACTTCC GCTTTGCCCT GTGCGCCGAG GACCTGGGCA TTGGCAAGCC AGACCCGGCG
CCGTTCCTCG AAGCGCTACG CCGTGGCGAG GTGGACGCGG GTGCGGCGGT GCACATCGGC
GATCACCCTG GCGATGACAT TGCCGGTGCC CAGCGCGCCG GTTTGCGCGC GGTGTGGTTC
AACCCGCAGG GCAAGGCCTG GACTGGCGAT CAGGCGCCGG ATGCCGAAAT CCAGCGCCTG
TCGCAGCTGC CCGACGTGCT CGCGCGCTGG CGCTGA
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| Protein sequence | MSIKLITFDL DDTLWDTAPV IATAEVVLRD WLEANAPTLG SVPVEHLFAI RERLVQAEPG
LKHRISALRR RVLFHALEEV GYSEQHAQAL ANEGFEVFLH ARHQVEIFPE VQPVLEILRH
QYILGVVTNG NADVSRLGLA DYFRFALCAE DLGIGKPDPA PFLEALRRGE VDAGAAVHIG
DHPGDDIAGA QRAGLRAVWF NPQGKAWTGD QAPDAEIQRL SQLPDVLARW R
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