| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5229 |
|---|
| Symbol | |
|---|
| ID | 1042390 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 5963192 |
|---|
| End bp | 5963902 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637148628 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_747330 |
|---|
| Protein GI | 26991905 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3159] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATC AGCCCAAGGT TGTACCCAAG CAGTCCACCG AGCTCGATGC CGAAGCGGTG
GTCGCCTACC TGCGCGCCCA CCCCACCTTC TTCGCCGAGC ACGACGAGCT GCTGATCGAA
CAGCACATCC CGCACCAGCG AGGAGACAGC GTGTCGCTGG TGGAACGCCA GCTCAAGCTG
CTGCGTGACC GCAACATCGA AATGCGCCAT CGCCTGTCGC AACTGATGGA CGTGGCCCGC
GACAACGACC GGCTGTTCGA CAAGACCCGC CGGCTGATCC TTGACCTGCT CGATGCCGGC
AGCCTGGAAG AAGTGGTAAT GGCGGTCGAA GACAGCCTGC GCCAGGAATT CCAGGTCCCC
TTCGTCAGCC TGATCCTGTT CGGCGACAAC GTCGCGCCAG TCGGGCGCTG GGTCAGCAAT
GCCGAGGCGC AGCAAGCCAT CGGTGCCCTG CTGGGCGGTG GCAAGACCGT CAGTGGCAAC
CTGCGCGAGC ACGAGCTGGC GTTCCTGTTC GGTGAAGAAC AGCGCCGGGA AGTAGGCTCC
AGCGCCGTGG CAGCTCTTGA GTACCAGGGG CTGCATGGGG TTCTGGCCAT CGGCAGCCGC
GACCCGCAAC ACTACAAGAG CAGCGTCGGT ACCCTTTTCC TCGGCTATAT CGCCGAGGTG
CTTGGCCGCG TTGTGCCACG CGTCACCCAG ACCCTGCGCC CGGTACGCTG A
|
|---|
| Protein sequence | MTDQPKVVPK QSTELDAEAV VAYLRAHPTF FAEHDELLIE QHIPHQRGDS VSLVERQLKL
LRDRNIEMRH RLSQLMDVAR DNDRLFDKTR RLILDLLDAG SLEEVVMAVE DSLRQEFQVP
FVSLILFGDN VAPVGRWVSN AEAQQAIGAL LGGGKTVSGN LREHELAFLF GEEQRREVGS
SAVAALEYQG LHGVLAIGSR DPQHYKSSVG TLFLGYIAEV LGRVVPRVTQ TLRPVR
|
|---|
| |