| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5221 |
|---|
| Symbol | |
|---|
| ID | 1042435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 5955969 |
|---|
| End bp | 5956457 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637148620 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_747322 |
|---|
| Protein GI | 26991897 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1671] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.874189 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGGCG CATTGAGTTC ATGTAGAGAG TGTCCAATGC GTGTATGGAT CGATGCCGAC
GCCTGCCCCA AGGCGGCCAA GGATCTGATC GTCAAGTTCG CCCTCAAGCG CAAGTTCGAG
GTGGTGATGG TGGCGGGGCA GGCGGTGGCC AAGCCGGCGT TCGCGATCGT GCGCCTGATC
GTGGTGCCCA GCGGCATGGA TGCGGCCGAC GACTACATTG TGGAGCACGC CGTGCCGGGC
GAGCTGGTGA TCTGCAGTGA CGTGCCGCTG GCCGACCGCC TGGTGAAAAA GGGCGTGGCC
GCGCTGGACC CGCGTGGGCG CGAGTTCGAC GAGCGCAACA TGGGCGACCG CCTGGCGGCG
CGCAACCTGT TCACCGAGCT GCGTGAGCAG GGCCAGGTGG GGGGCGGGCA GGCGGCCTAT
GGCGAACGTG AGAAACAGGC GTTTGCCAAT GCACTGGACC GGATCATTGC CCGGCTCTCG
AAAGGCTGA
|
|---|
| Protein sequence | MMGALSSCRE CPMRVWIDAD ACPKAAKDLI VKFALKRKFE VVMVAGQAVA KPAFAIVRLI
VVPSGMDAAD DYIVEHAVPG ELVICSDVPL ADRLVKKGVA ALDPRGREFD ERNMGDRLAA
RNLFTELREQ GQVGGGQAAY GEREKQAFAN ALDRIIARLS KG
|
|---|
| |