| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5212 |
|---|
| Symbol | |
|---|
| ID | 1042424 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 5944565 |
|---|
| End bp | 5945533 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637148611 |
|---|
| Product | CDP-6-deoxy-delta-3,4-glucoseen reductase |
|---|
| Protein accession | NP_747313 |
|---|
| Protein GI | 26991888 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases
[COG0633] Ferredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.949607 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGTAA CGTTGCAGCC GTCCGGGGCG GTGCTGGCGC TTGAACCCGG GGAAAGGATC
CTGGATGGAG CACGGCGGCT GGGCTATGAC TGCCCAAACA GCTGCCGCAA TGGCAATTGC
CATGTTTGCG CCGCGTTGTT GGTTGAAGGG CGGGTTCGCC AGGATGGCGA AGTCCGCGAC
CATGGCGAGT TGTTCACCTG CATTGCCGAA CCGCTGGAGG ACTGCGTGTT GCTCTGGGAC
GGTGTGCTTG CCTTGGGCGA ACTGCCAGTG CGCAAGCTGG CGTGCAGCGT CAGTGAGTGC
GTCGACGTCG GCGGCGACGT CTGGCGGGTG CGCCTGCGTG CGCCTGCCGG CAAGCCTCTG
CGCTACCACG CGGGGCAATA CCTGATGATC GAACGTGAGG GCGGCAAGCA GGCAGCCTTC
TCGCTGGCGT CCGCGCCACA TGCCGGGCGT GAACTGGAGC TGCATGTGCT GGCGCGTGAG
CCCAGTGCGG TGCAACTGAT CGACCAGCTC AGGCGAGATG GCCTGGCGCG CATCGAAATG
CCGTTTGGCG ACACCCACCT GGCCGAGCTG CCTGACGGGC CGCTGGTGCT GATTGCCGCT
GGCACCGGAA TGGGCCAGAT GCACAGCCTG GTCGAGCACT GCCGGGCTCA GGGCTTCAAG
CACCCGGTTC ACCTGTATTG GGGGGTGCGC CGGCCTGAGG ATTTCTATCA GATAGAGCAC
TGGGACGAAT GGCAGCGTCT GCCTAACCTG TTCCTGCATC AAGTGGTCAG CGACCTGTGC
GGCTGGGAAG GCCGCTGCGG CATGCTGCAT GAAGCGGTCT GCGAAGACAT TGCCGACCTC
AATAGTGTGC ATGTGTATGC CAGCGGCTCA CCGAACATGA TCTATGCCAC GCTCGACGCC
CTGGTCGAAG CCGGTATGGA TGCGCACCGC ATGCGTGCCG ATGTGTTTGC CTACGCGCCG
CGCGGTTAA
|
|---|
| Protein sequence | MQVTLQPSGA VLALEPGERI LDGARRLGYD CPNSCRNGNC HVCAALLVEG RVRQDGEVRD
HGELFTCIAE PLEDCVLLWD GVLALGELPV RKLACSVSEC VDVGGDVWRV RLRAPAGKPL
RYHAGQYLMI EREGGKQAAF SLASAPHAGR ELELHVLARE PSAVQLIDQL RRDGLARIEM
PFGDTHLAEL PDGPLVLIAA GTGMGQMHSL VEHCRAQGFK HPVHLYWGVR RPEDFYQIEH
WDEWQRLPNL FLHQVVSDLC GWEGRCGMLH EAVCEDIADL NSVHVYASGS PNMIYATLDA
LVEAGMDAHR MRADVFAYAP RG
|
|---|
| |