| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5194 |
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| Symbol | gcvT |
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| ID | 1042486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5925053 |
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| End bp | 5926135 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637148593 |
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| Product | glycine cleavage system aminomethyltransferase T |
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| Protein accession | NP_747295 |
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| Protein GI | 26991870 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.148183 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACAGC GCACGCTTTT GTATGACCTG CACCTGGCGC TAGGCGCCAA GACGGTCGAT
TTCGGTGGCT GGGACATGCC CCTGCACTAT GGCTCGCAGG TCGAGGAGCA CCATCAGGTG
CGCAGCGATT GCGGCGTCTT CGATGTTTCT CATATGACCG TGATCGATGT CGACGGCACT
GATGCCACAG TTTGGCTGCA GCGCCTGCTG GCCAACGACG TGGCCCGCCT CGACGACCCC
GGCAAGGCGC TGTATAGCCC GCTGCTGAAC GAACAGGGCG GGGTGATCGA TGATCTGATT
GTCTACCGCA CTGAAACCGG CTATCGCCTG GTCACCAATG CCGCCACCCG TGCCAAGGTG
CTCGATTGGC TGCAATTGCA ACGTGCCGGT TTTTCCGTGG ACTTCCAGGT CCGCCCTGAT
CTGGCCATCC TTGCCATCCA GGGGCCGCGT GCCCGCGAAA AGGTGGCGGC CCTGCTCAGC
CCCGCGCGCG CTGCACTCAT CCGCGAACTG CGCCCGTTCG AGGGCGTTGC CGACGGCGAC
TGGTTCATTG CCCGCACCGG CTATACCGGT GAGGACGGCC TGGAGATCAT CTTCCCGGGC
GATCAGGCGG TGGCCTTCTT CAACGACCTG GTCGGCGCCG GTATCGCCCC AAGCGGCCTG
GGCGCCCGCG ATACCCTGCG CCTGGAAGCC GGCATGAACC TGTACGGCCA GGACATCGAC
GAAAACCACA CCCCGCTCAC CTCCAACCTG GGCTGGAGCA TCGCCTGGGA ACCGGCCGAG
CGCAACTTCA TCGGCCGTGT CGGCCTGCTT GCGGAAATCG AGCACGGCGT GCAGGAAAAG
CTGGTGGGTC TGGTGCTGGA AGAGCGCGGT GTACTGCGCG CCCATCAGGT CGTGCGTGTA
GCCGGCATTG GCGAAGGGGA GATCACCAGT GGTAGTTTCT CGCCTACGCT GAGCAAGTCC
ATTGCGTTGG CGCGTGTGCC TATGGCTACC GGGGATCGGG CCGAGGTGGA AATTCGCGGC
AAGTGGTACC CGGTGCGGGT GGTCAAACCG ACCTTCGTGC GCCACGGCAA GATTCTGATC
TGA
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| Protein sequence | MGQRTLLYDL HLALGAKTVD FGGWDMPLHY GSQVEEHHQV RSDCGVFDVS HMTVIDVDGT
DATVWLQRLL ANDVARLDDP GKALYSPLLN EQGGVIDDLI VYRTETGYRL VTNAATRAKV
LDWLQLQRAG FSVDFQVRPD LAILAIQGPR AREKVAALLS PARAALIREL RPFEGVADGD
WFIARTGYTG EDGLEIIFPG DQAVAFFNDL VGAGIAPSGL GARDTLRLEA GMNLYGQDID
ENHTPLTSNL GWSIAWEPAE RNFIGRVGLL AEIEHGVQEK LVGLVLEERG VLRAHQVVRV
AGIGEGEITS GSFSPTLSKS IALARVPMAT GDRAEVEIRG KWYPVRVVKP TFVRHGKILI
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