| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5180 |
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| Symbol | potF-1 |
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| ID | 1042497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5906863 |
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| End bp | 5907957 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637148579 |
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| Product | putrescine ABC transporter, periplasmic putrescine-binding protein |
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| Protein accession | NP_747281 |
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| Protein GI | 26991856 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCTATTT CTGTATTCCG CAAGGCCTTG ATGGCTGGCG CGGGCCTGAC GCTGGCATGC
AGCGTCCAAG CGGCGCCGAC GGTGCACTTC TATAACTGGT CCGACTACAT CGGCCCCACC
ACACTCGCGG ACTTCGAGAA AGCCACGGGC ATCAAGCCTG TGCAAGATGT GTTCGACTCC
AACGAAACCC TGGAAGGCAA GCTGCTGGCC GGTAACACCG GCTATGACGT GGTGGTGCCG
TCCAACCATT TCCTCGGCAA GCAGATCAAG GCGGGCGCCT TCCAGAAGCT CGACAAGAAC
CTGCTGCCCA ACTATTCCAA TCTCGACCCG GCGTTGATGA AGCGCCTGGA AAAGAACGAC
CCGGGCAACC AGTACGCGGT GCCTTACCTG TGGGGTACCA ACGGCATCGG TTACAACGTC
GACAAGGTCA AGGCCGCGCT GGGCGTGGAC ACCATCGACT CCTGGGCCGT GCTGTTCGAA
CCCGAAAACA TGAAGAAGCT CTCCAAGTGC GGTGTGGCCT TCCTCGACTC GGCGGACGAA
ATGCTGCCAG CGGTGCTCAA CTACATGGGC CTCAACCCGA ACAGCACCGA CCCCAAGGAT
TACGCCAAGG CCGAGCAGAA GCTGCTGGCC GTGCGCCCGT ACGTGACCTA CTTCCACTCG
TCCAAGTACA TCACCGACCT GGCCAATGGC GACATCTGCG TCGCGGCAGG TTTCTCGGGT
GATGTATTCC AGGCCAAGGC CCGCGCTGAA GAAGCGAAGA AGGGTGTGAA CCTGGCCTAC
GCCATTCCCA AGGAAGGCGG CAACCTCTGG TTCGACGTGC TGGCGATCCC CAAGGACGCC
AAGAACGTCA AAGAGGCGCA TGCCTTCATC AACTATTTGC TGAAACCTGA GGTTATCGCC
CAGGTCAGTG ATTACGTCGG TTACGCCAAC CCGAACCCCA AGGCTGGCGC CCTGATGGAC
CAGGCCGTAA GGACTGACGC CGCGGTTTAC CCACCGCAGG AAGTGCTGGA CAAGATGTTC
GTGAACTCAG AGTTGCCACC CAAGGTGCAA CGGCTGATGA CCCGCAGCTG GACCAAGGTC
AAGTCGGGCA AGTAA
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| Protein sequence | MSISVFRKAL MAGAGLTLAC SVQAAPTVHF YNWSDYIGPT TLADFEKATG IKPVQDVFDS
NETLEGKLLA GNTGYDVVVP SNHFLGKQIK AGAFQKLDKN LLPNYSNLDP ALMKRLEKND
PGNQYAVPYL WGTNGIGYNV DKVKAALGVD TIDSWAVLFE PENMKKLSKC GVAFLDSADE
MLPAVLNYMG LNPNSTDPKD YAKAEQKLLA VRPYVTYFHS SKYITDLANG DICVAAGFSG
DVFQAKARAE EAKKGVNLAY AIPKEGGNLW FDVLAIPKDA KNVKEAHAFI NYLLKPEVIA
QVSDYVGYAN PNPKAGALMD QAVRTDAAVY PPQEVLDKMF VNSELPPKVQ RLMTRSWTKV
KSGK
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