Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5177 |
Symbol | potI |
ID | 1042526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5903842 |
End bp | 5904735 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637148576 |
Product | ornithine carbamoyltransferase |
Protein accession | NP_747278 |
Protein GI | 26991853 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00577642 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCT TCAGTTTCTC CAAGCTGATG CTGGTGCTCG GCTTGCTGTT CATCTACCTG CCGATGCTGA TCCTGGTGAT CTACTCGTTC AACGCCTCCA AACTGGTGAC GGTGTGGGGC GGCTGGTCGA TCAAATGGTA CGTCGGCCTG CTCGACAACT CCCAGCTGAT GGGTTCGGTG ATGCGCTCGC TGGAAATCGC TTGCTACACG GCGGTGGCGG CAGTGGCGCT GGGTACCCTG GCGGCCTTCG TGCTGACCCG CGTCACCCGC TTCAAGGGCC GCACGCTGTT CGGTGGCCTG GTCACTGCGC CGCTGGTAAT GCCCGAAGTG ATCACCGGTC TGTCGCTGTT GCTGCTGTTC GTGGCCATGG CGCAGATGAT CGGCTGGCCT CAGGAGCGGG GTATCGTCAC CATCTGGATC GCCCATACAA CGTTCTGTGC GGCGTATGTG GCGGTGGTGG TGTCGGCTCG CCTGCGTGAG CTGGACCTGT CGATCGAGGA AGCGGCGATG GACCTGGGTG CCAAGCCGTG GAAGGTGTTC TTCCTGATCA CCATCCCGAT GATCGCGCCA TCGCTGGCGG CGGGCGGCAT GATGTCGTTT GCCCTGTCGC TGGACGACCT GGTATTGGCC AGCTTCGTCT CCGGGCCTGG CTCGACCACC TTGCCGATGG AAGTGTTCTC GGCGGTGCGC CTGGGTGTGA AGCCTGAGAT CAACGCCGTG GCCAGCCTGA TCTTGCTGTC GGTATCGCTG GTGACCTTCT TCGTCTGGTA CTTCAGCCGC CAGGCCGAAG AGCGTCGTCG CAAGGCGATT CAGCAGGCGA TCGAAGAGGG TGCTGCAGCC AACGCTTCGC AGCCGCAGGT CAAGCGCCCG GCGCAGGTGG CTGCGTCGGC CTGA
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Protein sequence | MKRFSFSKLM LVLGLLFIYL PMLILVIYSF NASKLVTVWG GWSIKWYVGL LDNSQLMGSV MRSLEIACYT AVAAVALGTL AAFVLTRVTR FKGRTLFGGL VTAPLVMPEV ITGLSLLLLF VAMAQMIGWP QERGIVTIWI AHTTFCAAYV AVVVSARLRE LDLSIEEAAM DLGAKPWKVF FLITIPMIAP SLAAGGMMSF ALSLDDLVLA SFVSGPGSTT LPMEVFSAVR LGVKPEINAV ASLILLSVSL VTFFVWYFSR QAEERRRKAI QQAIEEGAAA NASQPQVKRP AQVAASA
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