| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5174 |
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| Symbol | |
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| ID | 1042515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5900875 |
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| End bp | 5901942 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637148573 |
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| Product | RND efflux transporter |
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| Protein accession | NP_747275 |
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| Protein GI | 26991850 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.274772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGTC TGTTGCTGAT GCTCTCGGCC GCTGTGCTGC TGGTCGGTTG CACTAGTGAA
GAAGAGGCAC CAGAGGTGAT CCGGCCAGTG CTGTCGGTCA AGGTCGAACC TCAGGTGCAG
TCGCAGCTGG GCCGCTTCGC CGGCAGTATC CAGGCGCGCT TCGAAAGCAC CTTGGGCTTC
CGGGTTTCCG GGCGCATTGC CCGACGCTGG CTGGACGTGG GCGCCCAGGT GAAGCCGGGC
GACACCTTGG CCACCCTGGA CCCGACCGAC CAGCAGAACC AGTTGCGCGC CGCCGAAGGC
GATCTGGCCA AGGTGCAGGC ACAGTGGATC AACGCCCAGG CCGATGCCCG TCGCCAGCAG
CAGTTGTATG ACCGTGGGGT AGGCGCCCAG GCACAGCTGG ATATCGCCCA GACCAACCTG
AAAACCACCA GTGCGGCGTT GGAGCAGGCG CGCTCCGCCG TCAGCCAGGC CCGTGACCAG
CTTGACTACA GCACCCTGCG TGCAGACCAC GCTGCCGTGA TTACCGCGTG GCAGGCCGAA
GCCGGGCAAA CCGTTACCGC CGGGCAAGCC GTGGTGACCC TGGCCCGGCC GGACGTGAAG
GAGGCGGTAA TCGACCTGCC GATCGGCCTG GCCGAGCAGT TGAGCAAAGG CCTGACCTTC
ACCGTTGCCT CGCAACTGGA CCCGACCATC AACACCACGG CCAGCCTGCG TGAACTGGAG
CCCCAGGCTG ATGCTACCAC CCGTACCCGC CGCGCTCGCC TGACCCTGGC CAGCACACCG
GCGGCCTTTC ACCTCGGCAC CGCCATCAGT GTGACCCTTA GCTCGGAAGT GTCCCCGCGC
AGCGAACTGC CCTTGAGTGC CTTGCTCGAG CGTGATGGCA AGACCCAGGT GTGGGTGATC
GATACGCAGA ACAAGACCGT GGCCACCCGT GACGTGGCGC TGATCGACCG CACCGCTGAC
AGCATCGTGC TGAGCGCCGG TGTGCAGCCC GGTGAGCGCG TGGTCACCGC CGGCGTCAAC
AGCCTCAAGC CTGGCCAGAA GGTCACCTTC GACGAGGATG CGCAATGA
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| Protein sequence | MKRLLLMLSA AVLLVGCTSE EEAPEVIRPV LSVKVEPQVQ SQLGRFAGSI QARFESTLGF
RVSGRIARRW LDVGAQVKPG DTLATLDPTD QQNQLRAAEG DLAKVQAQWI NAQADARRQQ
QLYDRGVGAQ AQLDIAQTNL KTTSAALEQA RSAVSQARDQ LDYSTLRADH AAVITAWQAE
AGQTVTAGQA VVTLARPDVK EAVIDLPIGL AEQLSKGLTF TVASQLDPTI NTTASLRELE
PQADATTRTR RARLTLASTP AAFHLGTAIS VTLSSEVSPR SELPLSALLE RDGKTQVWVI
DTQNKTVATR DVALIDRTAD SIVLSAGVQP GERVVTAGVN SLKPGQKVTF DEDAQ
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