Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5159 |
Symbol | |
ID | 1042586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5884506 |
End bp | 5885129 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637148558 |
Product | 2OG-Fe(II) oxygenase |
Protein accession | NP_747260 |
Protein GI | 26991835 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3751] Predicted proline hydroxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.767361 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACATAT CCCCTGAACA CCCGATGCTT GCGGCCGTCG TCGACGATCT GGCCACCCAT GGCTGGTCCC AGCAGGCGCA CTTTCTGCCT GCCGACCTGG TGCGCGCACT TGCAGCCGAG TGCCGGCGCC GTGATGCCGA AGGCGAACTC AACCCCGCAG GGGTTGGGCG GGGAGCTACC CAGGAGGTGC GCGAAACCAT TCGCGGTGAC CAGATCCAGT GGATCGACCC GGGGCAGGCC GAGGCCTGCG ACCAGTACCT GGCGGCCATG GATCAGCTGC GCCTGGCAAT CAACCAAGGC CTTTTCCTGG GCCTGGAAGA CTTCGAATGC CACTTTGCCC TGTATCCACC GGGGGCATTC TATCGCCGGC ACCTGGATCG TTTTCGCGAC GATGACCGGC GCATGGTCTC GGCGGTGCTT TACCTCAATG AAGGCTGGCA ACCGCATGAC GGTGGCCAGT TGCGCATGTT CCTGGCCGAC GGTGTCGAGC ACGATGTCGA GCCAGTGGCC GGTTGCCTGG TGGTATTCCT GTCGGGCGAA GTGCCTCACG AAGTACTGCC GGCCGGGCGT GAGCGGCTGT CATTGACCGG CTGGTTCAGG CGGCGTGGCA ATGACCCGTT CTGA
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Protein sequence | MHISPEHPML AAVVDDLATH GWSQQAHFLP ADLVRALAAE CRRRDAEGEL NPAGVGRGAT QEVRETIRGD QIQWIDPGQA EACDQYLAAM DQLRLAINQG LFLGLEDFEC HFALYPPGAF YRRHLDRFRD DDRRMVSAVL YLNEGWQPHD GGQLRMFLAD GVEHDVEPVA GCLVVFLSGE VPHEVLPAGR ERLSLTGWFR RRGNDPF
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