Gene PP_5159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5159 
Symbol 
ID1042586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5884506 
End bp5885129 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content64% 
IMG OID637148558 
Product2OG-Fe(II) oxygenase 
Protein accessionNP_747260 
Protein GI26991835 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3751] Predicted proline hydroxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.767361 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATAT CCCCTGAACA CCCGATGCTT GCGGCCGTCG TCGACGATCT GGCCACCCAT 
GGCTGGTCCC AGCAGGCGCA CTTTCTGCCT GCCGACCTGG TGCGCGCACT TGCAGCCGAG
TGCCGGCGCC GTGATGCCGA AGGCGAACTC AACCCCGCAG GGGTTGGGCG GGGAGCTACC
CAGGAGGTGC GCGAAACCAT TCGCGGTGAC CAGATCCAGT GGATCGACCC GGGGCAGGCC
GAGGCCTGCG ACCAGTACCT GGCGGCCATG GATCAGCTGC GCCTGGCAAT CAACCAAGGC
CTTTTCCTGG GCCTGGAAGA CTTCGAATGC CACTTTGCCC TGTATCCACC GGGGGCATTC
TATCGCCGGC ACCTGGATCG TTTTCGCGAC GATGACCGGC GCATGGTCTC GGCGGTGCTT
TACCTCAATG AAGGCTGGCA ACCGCATGAC GGTGGCCAGT TGCGCATGTT CCTGGCCGAC
GGTGTCGAGC ACGATGTCGA GCCAGTGGCC GGTTGCCTGG TGGTATTCCT GTCGGGCGAA
GTGCCTCACG AAGTACTGCC GGCCGGGCGT GAGCGGCTGT CATTGACCGG CTGGTTCAGG
CGGCGTGGCA ATGACCCGTT CTGA
 
Protein sequence
MHISPEHPML AAVVDDLATH GWSQQAHFLP ADLVRALAAE CRRRDAEGEL NPAGVGRGAT 
QEVRETIRGD QIQWIDPGQA EACDQYLAAM DQLRLAINQG LFLGLEDFEC HFALYPPGAF
YRRHLDRFRD DDRRMVSAVL YLNEGWQPHD GGQLRMFLAD GVEHDVEPVA GCLVVFLSGE
VPHEVLPAGR ERLSLTGWFR RRGNDPF