Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_5157 |
Symbol | |
ID | 1042583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5883408 |
End bp | 5883896 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637148556 |
Product | hypothetical protein |
Protein accession | NP_747258 |
Protein GI | 26991833 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.809512 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTCGA CCATAGGGGT ACTGCTGGCA GTACTGATCA GTCCATTGGC TCAGGCGGAG CTGATCGACG AAATCGCCGA CCGGGGCGAA CTGCGCATTG CCGTACAGGC CGAGAACTCG CCATACGCCT TCAAGCAAGA CGACCACCTG ACAGGTTTCG ACATCGAATT TGGCCAGGCC CTGGCCAAGG AACTGGATTT GCGCGCCGAG TTCGTCGAAG CCCCGGCTAC CGAAGTGCTG GCGGGTGTCG AGAGTGGCAA GTACGACATC GCATTCACCC CGTCGAGTGA ATCGCTCACA GGCGACGGCC CGCTCGATGT AAGCCTGCCG ATTGGCGAGA AGAAGCTGGT GATCCCGTTC CAGAAGGACA ACCCGGCTTT TGAAAGTGCC GTAAACAATG CGTTGCAACG TTTGAAAGAC AGTGGCCGGA CTGCCGAACT TGAGCAGAAG TGGTTCAAGG GTGTGCAGGA GACTGCAGGC GGGCAGTAA
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Protein sequence | MRSTIGVLLA VLISPLAQAE LIDEIADRGE LRIAVQAENS PYAFKQDDHL TGFDIEFGQA LAKELDLRAE FVEAPATEVL AGVESGKYDI AFTPSSESLT GDGPLDVSLP IGEKKLVIPF QKDNPAFESA VNNALQRLKD SGRTAELEQK WFKGVQETAG GQ
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