Gene PP_5153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5153 
Symbol 
ID1042574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5879170 
End bp5879835 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content63% 
IMG OID637148552 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionNP_747254 
Protein GI26991829 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.479206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.779527 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTACC AGCACCAGTA CGTAGACGGC ACGCGCATTC ACTTCCCCTT GGGCAAGGTG 
GTGTGCATCG GCCGTAACTA TGCCGAGCAT GCCAAGGAAC TGGACAACCC GATCCCCACC
GAGCCGCTGC TGTTCATCAA GCCAGGCAGC TGCGTGGTGC CGGCCGAAGG TGGCTTCAAG
ATCCCGGCCG AGCGCGGGTC GGTGCACTAT GAGGTTGAAA TCGCCGTGCT GCTGGGCAAG
CCGCTGTCGA CCCACCCGAG CGAGGAAGAG GTGCTGGACG CCATTTCCGG TTACGCACCG
GCGCTGGACC TGACCCTGCG CGACGTGCAG GCCAAACTGA AGGAAAAGGG GCTGCCCTGG
GAGCTGGCCA AGTGCTTTGA CGGCGCTTGC GTGCTGCCAC CGTTCGTCTC GGCCGCCAGC
TTCGAGGACG TGACAGACAT CCCGGTGCGC CTGACCGTGA ACGGCGAAGT ACGCCAGGAT
GGTAATAGCG CGATGATGCT GAACCCGATC GTGCCGATGA TTCAGTACAT GGCAGCGCAT
TTCTCGCTAC AAGCGGGGGA TGTGATCCTC ACCGGTACCC CGGCCGGCGT CGGGCCGTTC
AATGTCGGTG ACGAGCTGGT GCTGGAGCTG CCGGGTGTGA GCCGCTTCGA AAGCCGGGTG
CTTTGA
 
Protein sequence
MSYQHQYVDG TRIHFPLGKV VCIGRNYAEH AKELDNPIPT EPLLFIKPGS CVVPAEGGFK 
IPAERGSVHY EVEIAVLLGK PLSTHPSEEE VLDAISGYAP ALDLTLRDVQ AKLKEKGLPW
ELAKCFDGAC VLPPFVSAAS FEDVTDIPVR LTVNGEVRQD GNSAMMLNPI VPMIQYMAAH
FSLQAGDVIL TGTPAGVGPF NVGDELVLEL PGVSRFESRV L