| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5149 |
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| Symbol | ilvA-2 |
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| ID | 1041646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5874647 |
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| End bp | 5876161 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637148548 |
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| Product | threonine dehydratase |
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| Protein accession | NP_747250 |
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| Protein GI | 26991825 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.436778 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGAAC AGTACGTCAA GAAGATCCTC ACCTCGCGCG TCTATGACGT TGCCGTCGAA
ACCCCGTTGC AGAGCGCCGG GCAGCTGAGC AAGCGCCTGG GCAACCAGAT TCTGCTCAAG
CGCGAAGACC TGCAGCCAGT ATTCTCGTTC AAGATCCGCG GCGCGTATAA CAAGCTGGCC
CAGCTGAGCC CGGAAGAACT GGCCCGCGGG GTGGTGACCG CCTCTGCCGG CAACCACGCC
CAAGGCCTGG CCCTGGCCGC GCGTGAAATG GGCATCAAGG CCACCATCGT GATGCCCAAG
ACCACTCCGG AGATCAAGGT CGAAGGCGTG CGCTCGCGCG GTGGCAAGGT GGTGCTGCAT
GGCGACTCGT TCCCTGAGGC ACTGGCCTAT TCGCTGAAAC TGGTCGATGA AAAGGGCTTC
GTCTACGTTC ACCCTTACGA CGATCCGCAC ACCATCGCCG GGCAGGGCAC CGTCGCCATG
GAAATCCTGC GCCAGCACCC TGGCCGGCTG GATGCGATCT TCGTGCCGGT GGGCGGTGGC
GGCCTGATCG CCGGCATTGC TGCCTATGTG AAGTACCTGC GCCCGGAAAT CAAGATAATC
GGTGTCGAGC CGGACGATTC CAACTGCCTG CAGGCGGCCA TGGCTGCCGG TGAGCGTGTG
GTGCTGCCGC AGGTCGGGCT GTTCGCCGAT GGCGTGGCGG TGGCGCAGAT TGGCCAGCAC
ACCTTCGATA TCTGCCGCCA CCATGTGGAC GAAGTCGTCA CTGTCAGTAC CGATGAAATC
TGCGCAGCAA TCAAGGATAT CTACGACGAT ACCCGCTCGA TCACCGAGCC TGCTGGCGCG
CTGGGTGTGG CGGGCATCAA GAAGTACGTC GAGCTATACG GCGTCAGCGG CCAGACCTTG
GTGGCCATCG ACTCCGGTGC CAACGTCAAT TTCGATCGCC TGCGCCATGT GGCCGAACGT
GCCGAGCTGG GTGAAAAGCG CGAGGCGATC ATCGCCGTGA CCATCCCTGA GCGCCCGGGT
AGCTTCAAGG CCTTCTGCGA GGCTATCGGC AAGCGTCAGA TCACCGAGTT CAACTACCGC
AAGCACACCT CTGACGAAGC GCATATCTTC GTTGGGGTGC AGACCCACCC GGAAAACGAC
CCGCGCGCGG CGCTGGTGCA GCAACTGACC GAACAGGGCT TCCCGGTTAC CGATCTGACC
GACAACGAAT TGGCCAAGCT GCATATTCGT CATATGGTCG GCGGCCACTC GGCCGGTGCC
AGCGACGAAA TGGTGCTGCG CTTCGAATTC CCCGAGCGGC CAGGGGCACT GTTCAACTTC
CTCAACAAGC TGGGCGGGCG CTGGAACATC TCGATGTTCC ACTACCGCAA CCATGGCGCG
GCTGACGGGC GCGTGGTGGC GGGGCTGCAG GTGCCGGAGG ACGAACGTCA CCTGGTGCCG
GCAGCGCTGG CCAAGATCGG TTACCCGTAC TGGGACGAGA CCGAAAACCC GGCCTACAAA
CTGTTCCTGG GCTGA
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| Protein sequence | MLEQYVKKIL TSRVYDVAVE TPLQSAGQLS KRLGNQILLK REDLQPVFSF KIRGAYNKLA
QLSPEELARG VVTASAGNHA QGLALAAREM GIKATIVMPK TTPEIKVEGV RSRGGKVVLH
GDSFPEALAY SLKLVDEKGF VYVHPYDDPH TIAGQGTVAM EILRQHPGRL DAIFVPVGGG
GLIAGIAAYV KYLRPEIKII GVEPDDSNCL QAAMAAGERV VLPQVGLFAD GVAVAQIGQH
TFDICRHHVD EVVTVSTDEI CAAIKDIYDD TRSITEPAGA LGVAGIKKYV ELYGVSGQTL
VAIDSGANVN FDRLRHVAER AELGEKREAI IAVTIPERPG SFKAFCEAIG KRQITEFNYR
KHTSDEAHIF VGVQTHPEND PRAALVQQLT EQGFPVTDLT DNELAKLHIR HMVGGHSAGA
SDEMVLRFEF PERPGALFNF LNKLGGRWNI SMFHYRNHGA ADGRVVAGLQ VPEDERHLVP
AALAKIGYPY WDETENPAYK LFLG
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