Gene PP_5144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5144 
Symbol 
ID1042588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5869484 
End bp5870230 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content66% 
IMG OID637148543 
Producthypothetical protein 
Protein accessionNP_747245 
Protein GI26991820 
COG category[S] Function unknown 
COG ID[COG3332] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.142216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.436778 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCCTGA TCGTATTTGC CTGGCGGCCG GGGCACGCCC TGCCGCTGAT CGTGGCGGCC 
AACCGCGACG AATTCTATGC CCGCCCCACT CAGCCCCTGG CGGCCTGGGA GGATGCACCT
GGGGTGCATG CCGGGCGCGA CCTGGAGGCA GGCGGTACCT GGCTGGGCGT AGGCCCACAG
GGGCGCTTTG CCGCGCTGAC CAACATCCGC GACCCGGGCC AGGCGCAGGG GCCTCGCTCG
CGGGGTGAGC TGGTGGCAGC GTTTCTGCAG GGCGAGCTAG GAGTCGGGGC TTACCTGGAC
CAGGTGGCCA GCCGTAGCGG GCAGTACTCG GGGTTCAATT TGCTGGTGGG TGATGGGCAG
CGACTGGGTT ATCTGCATGC CCGTGAGGCC ACGCCGCGCC TGCTGAAGGC TGGGGTTTAT
GGGCTTTCGA ACGCCGGGCT GGATACACCG TGGCCGAAGC TGGTGAAGGC ACGTGACGGG
CTGGAAAACC TGCTGGACAC GCCGGAGCCG CACAGGCTGC TGGCTTTACT CGCGGATAAC
GAGCCCGCGG CTGATGGTGA CCTACCCGAA ACAGGCGTGG GGTTGGCGAC CGAGAAGTTG
CTGTCGAGCG TCTTCATCGC CAGCCAGAAT TACGGGACCC GGGCGAGCAC AGTGCTGATT
GTGGATGATC AGGGGCAAAG GCGGCTGGTT GAGCGCAGTT TCGGGCCTTT TGGCGGGCAT
TTGGGGGAAA TTGAGTTGTT GGTCTGA
 
Protein sequence
MCLIVFAWRP GHALPLIVAA NRDEFYARPT QPLAAWEDAP GVHAGRDLEA GGTWLGVGPQ 
GRFAALTNIR DPGQAQGPRS RGELVAAFLQ GELGVGAYLD QVASRSGQYS GFNLLVGDGQ
RLGYLHAREA TPRLLKAGVY GLSNAGLDTP WPKLVKARDG LENLLDTPEP HRLLALLADN
EPAADGDLPE TGVGLATEKL LSSVFIASQN YGTRASTVLI VDDQGQRRLV ERSFGPFGGH
LGEIELLV