| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5131 |
|---|
| Symbol | |
|---|
| ID | 1042595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 5853972 |
|---|
| End bp | 5855363 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637148530 |
|---|
| Product | sodium:dicarboxylate symporter |
|---|
| Protein accession | NP_747232 |
|---|
| Protein GI | 26991807 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1823] Predicted Na+/dicarboxylate symporter |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTGC CGCTGTCACT CAACCTGCTG GCGTTCCTGG CCCTGTTGCT GGGTCTGGCA
CAAACCCGCC GCACCGACTG GAGCCTGGCC AAGAAGGTAC TGCTTGGCCT GGTGCTGGGC
GTGGTCTTCG GCCTTGTGCT GCATACGATC TATGGCGCAG GCCACCCCGT GCTCAAGGCA
ACCATCGCCT GGCTCGATCT GGTCGGCAAC GGCTATGTCG GCCTGTTACA AATGATCGTC
ATGCCGCTGA TCTTCGCCTC GATCCTCAGT GCCGTGGCAC GTTTGCACAA TGCCTCTTCG
CTGGGCCGCA TCAGCGTGCT GAGCATCGGC ACCCTGCTGC TGACCACTGC CATTGCTGCC
CTGATCGGCA TTGTGTTGAC CAACCTGTTC GGCCTCAGCG CCGAGGGCCT GGTGGCCGGC
GCCCAGGAAA GCGCACGCAT GCAGGTTATC CACAGTGACT ACGCGGGCAA GGTCGCCGAC
CTCAACATCC CGCAACTGCT GCTGTCGTTC ATCCCCAGCA ACCCGATAGG CGACCTGGCG
CGGGCCAAGC CGACCTCGAT CATCAGCGTG GTGATCTTTG CCGTGTTCCT CGGCCTGGCC
GCGCTCCACT TGATCAAGGA CGACGCCGAG AAGGGCGAGC GCGCCCTGTC GGCCATCGAC
ACCCTGCAGG CCTGGGTAAT GCGCCTGGTG CGGGTCGTGA TGAAGCTGAC CCCCTATGGC
GTGCTGGCGT TGATGACCAA AGTAGTGGCC AGTTCCAACA CGGAGGACAT CCTCAAGCTG
GGCAGCTTCG TGGTGGTGTC GTACCTGGGC CTGGGGTTGA TGTTCGTGGT GCACGGCATC
ATCCTCGCCG CCACCGGCGT GAGCCCGCTG CGCTTCTTCC GCAAGGTGTG GCCGGTGCTG
ACCTTCGCCT TCACCAGCCG CTCCAGCGCC GCCAGCATTC CGCTGAACAT CGAGGCACAA
ACCCGCCGTC TGGGCGTGCC GCAATCGATC GCCAGCTTCA GCGCATCGTT CGGCACCACC
ATTGGCCAGA ACGGCTGCGC CGGGCTCTAT CCGGCCATGC TGGCGGTGAT GGTCGCGCCA
GCAGTAGGCA TCGACACCTT CGACCCGCTG TGGATCGCCA CCCTGGTGGC CATCGTCACG
CTGAGCTCTG CAGGGGTTGC CGGCGTGGGC GGCGGTGCCA CCTTTGCCGC GCTGATCGTG
CTGCCAGCCA TGGGCTTGCC GGTGGAACTG GTGGCGTTGC TGATTTCGGT GGAGCCGCTG
ATCGACATGG GCCGTACGGC GTTGAACGTG AACGGTTCGA TGACGGCGGG CGTTGTCACC
AGCCAGCTGT TGAAAGAGAC TGACAAGGAA GTGCTGGCCG GTGATGAACA TGCCGAGCTG
AGCCACACCT GA
|
|---|
| Protein sequence | MNLPLSLNLL AFLALLLGLA QTRRTDWSLA KKVLLGLVLG VVFGLVLHTI YGAGHPVLKA
TIAWLDLVGN GYVGLLQMIV MPLIFASILS AVARLHNASS LGRISVLSIG TLLLTTAIAA
LIGIVLTNLF GLSAEGLVAG AQESARMQVI HSDYAGKVAD LNIPQLLLSF IPSNPIGDLA
RAKPTSIISV VIFAVFLGLA ALHLIKDDAE KGERALSAID TLQAWVMRLV RVVMKLTPYG
VLALMTKVVA SSNTEDILKL GSFVVVSYLG LGLMFVVHGI ILAATGVSPL RFFRKVWPVL
TFAFTSRSSA ASIPLNIEAQ TRRLGVPQSI ASFSASFGTT IGQNGCAGLY PAMLAVMVAP
AVGIDTFDPL WIATLVAIVT LSSAGVAGVG GGATFAALIV LPAMGLPVEL VALLISVEPL
IDMGRTALNV NGSMTAGVVT SQLLKETDKE VLAGDEHAEL SHT
|
|---|
| |