Gene PP_5130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5130 
Symbol 
ID1041785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5852672 
End bp5853727 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content59% 
IMG OID637148529 
Producthypothetical protein 
Protein accessionNP_747231 
Protein GI26991806 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCG CTGTGAAAGC CGCCGCCATC GGCCTGTCCC TGCTGTTCAG TATCGAAACC 
TTCGCCACGG AGCTCAAACA CTGGCCCGCC GACGCGGCCA AACAGCTCGA CAGCATGATC
GCCGCCAATG CCAACAAGGG TAACTACGCG GTGTTTGACA TGGACAACAC CAGTTACCGC
TATGACCTGG AAGAAGCCTT GCTTCCGTTC ATGGAAAACA AGGGGCTGCT AAGCCGCGAC
AAGCTCGACC CTTCGTTGAA GTTGATGCCG TTCAAGGACA CTGCCGAGCA CAAGGAAAGC
CTGTTCAGTT ACTACTACCG GCTGTGTGAA ATCGATGACA TGGTCTGCTA CCCGTGGGTA
GCCCAGGTGT TCTCGGGCTT TACCTTGCAG GAGCTGAAGG CGCAGGTGGA TGAGCTGATG
GCTTCGACCA AGCCGATCCC CAGCACCTAT TACGAAGGCG ACCAGGTCAA GGCCATCGAG
GTTCAGCCGC CCAAGGTCTT CAAGGGCCAG GCCGAGCTGT ACAACAAGCT GATGGAGAAT
GGCATCGAGG TCTATGTGGT TTCGGCGGCC TCCGAAGAGC TGGTACGCAT GGTCGCCTCG
GACCCCAAGT ATGGATACAA CGTGAAACCC CAGAACGTGA TTGGCGTGAG CCTGCTGCTC
AAGGACCGCG CCAGCGGCCA GCTGACCACT GCGCGCAAGC AGATCAGCGC CGGGCACTAC
GATGCCAAGG CTAACGAGGG CCTGGAGCTG ACCCCTTACC TGTGGACCCC GGCCACCTGG
ATGGCGGGCA AGCAGGCGGC GATCCTTACC TACATCGATG AGTGGAAGAA ACCGGTGCTG
GTGGGCGGCG ACACGCCGAC CAGCGATGGC TACATGCAGT TCCACGGGGT GGATGTGGGC
AAAGGCGGTA TCCACCTGTG GATAAACCGC AAGGCCAAGT ACATGGACCA GCTCAACGGG
ATGATTGCCA AGAATGCGGC GGCGCAGGCC AAGGAAGGGT TGCCGGTGAC GGCAGACAAG
AACTGGGTGA TCGTCACGCC GGAGCAGATT CAATAG
 
Protein sequence
MKVAVKAAAI GLSLLFSIET FATELKHWPA DAAKQLDSMI AANANKGNYA VFDMDNTSYR 
YDLEEALLPF MENKGLLSRD KLDPSLKLMP FKDTAEHKES LFSYYYRLCE IDDMVCYPWV
AQVFSGFTLQ ELKAQVDELM ASTKPIPSTY YEGDQVKAIE VQPPKVFKGQ AELYNKLMEN
GIEVYVVSAA SEELVRMVAS DPKYGYNVKP QNVIGVSLLL KDRASGQLTT ARKQISAGHY
DAKANEGLEL TPYLWTPATW MAGKQAAILT YIDEWKKPVL VGGDTPTSDG YMQFHGVDVG
KGGIHLWINR KAKYMDQLNG MIAKNAAAQA KEGLPVTADK NWVIVTPEQI Q