Gene PP_5128 details

Gene Information

• Locus tag: PP_5128
• Symbol: ilvD
• ID: 1046050
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas putida KT2440
• Kingdom: Bacteria
• Replicon accession: NC_002947
• Strand: +
• Start bp: 5849287
• End bp: 5851128
• Gene Length: 1842 bp
• Protein Length: 613 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637148527
• Product: dihydroxy-acid dehydratase
• Protein accession: NP_747229
• Protein GI: 26991804
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR00110] dihydroxy-acid dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 24
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCTGATT ATCGTTCCAA GACTTCCACC CAAGGCCGCA ACATGGCCGG CGCCCGTGCC 
CTGTGGCGCG CCACCGGGAT GAAGGACGAA GACTTCAAGA AACCGATCAT CGCCATCGCC 
AACTCGTTCA CCCAGTTCGT ACCGGGCCAT GTGCACCTGA AGGACCTGGG CCAGCTGGTG 
GCTCGCGAAA TCGAACGCGC CGGTGGCGTG GCCAAGGAAT TCAACACCAT CGCGGTCGAT 
GACGGCATCG CCATGGGCCA CGACGGCATG CTGTACTCGC TGCCAAGCCG CGAAATCATT 
GCCGACGCCG TGGAATACAT GGTCAATGCG CACTGCGCCG ACGCCATCGT CTGTATCTCC 
AACTGCGACA AGATCACCCC CGGCATGCTG ATGGCCGCCC TGCGCCTGAA CATCCCGGTG 
ATCTTCGTTT CCGGCGGCCC GATGGAAGCC GGCAAGACCA AGCTGGCCAG CCACGGCCTG 
GACCTGGTCG ATGCCATGGT CATCGCGGCC GACTCCACGG CCTCCGACGA GAAAGTCGCC 
GAATACGAGC GCAGCGCCTG CCCGACCTGT GGTTCGTGCT CCGGCATGTT CACCGCCAAC 
TCGATGAACT GCCTGACCGA AGCCCTGGGC CTGGCCCTGC CGGGCAACGG TTCGACCCTG 
GCCACCCACT CCGACCGCGA GCAGCTGTTC CTCACGGCCG GCCGTACCAT CGTCGAGCTG 
TGCAAGCGCT ACTACGGCGA GAATGACGAG TCGGTCCTGC CACGCAGCAT CGCCAACTTC 
AAAGCGTTCG AAAACGCCAT GATGCTGGAC ATCGCCATGG GCGGCTCGAC CAACACCATC 
CTGCACCTGC TGGCAGCAGC ACAGGAAGGC GAAGTGGCGT TCGACCTGCG CGACATCGAC 
CGCCTGTCAC GCAAAGTGCC GCAGCTGTGC AAAGTGGCGC CGAACATCCA GAAGTACCAC 
ATGGAAGACG TCCACCGCGC CGGCGGCATC TTCAGCATCC TCGGTTCGCT GGCCCGTGGC 
GGCCTGCTGC ACACCGACCT GCCGACCGTG CACAGCCGCA GCATGGAAGA AGCCATCGCC 
AAATGGGACA TCACCCAGAC CGATGACGAA GCCGTGCACA CCTTCTTCAA GGCTGGCCCT 
GCCGGTATCC CGACCCAGAC CGCATTCAGC CAGTCGACCC GTTGGGAAAC CCTCGACGAC 
GACCGTGAAA ACGGCTGTAT CCGCAGCTTT GAACACGCCT ACTCGCAAGA GGGCGGCCTG 
GCCGTGCTGT ACGGCAACAT CGCACTGGAT GGCTGCGTGG TCAAAACCGC CGGTGTCGAC 
GAATCGATCC ACGTGTTCGA GGGCACCGCG AAGATCTTCG AAAGCCAGGA CAGCGCCGTG 
CGCGGCATCC TCGCCGACGA GGTGAAAGCC GGCGACATCG TCATCATCCG CTACGAAGGC 
CCGAAAGGCG GCCCGGGCAT GCAAGAAATG CTCTACCCGA CCTCGTACCT CAAGTCCAAA 
GGCCTGGGCA AGGCCTGCGC CCTGCTCACC GACGGTCGCT TCTCGGGCGG TACCTCGGGC 
CTGTCGATCG GCCACGCCTC GCCAGAGGCC GCGGCGGGCG GCGCCATCGG CCTGGTGCGC 
GACGGCGACA AGGTACTGAT CGACATCCCT AACCGCTCGA TCAACCTGCT GGTCAGCGAT 
GAAGAGCTGG CGCAACGCCG TGTCGAGCAG GACAAGAAGG GCTGGAAGCC AGCCGAGGTC 
CGTCCACGCA AGGTAACCAC CGCGCTCAAG GCCTATGCCC TGCTGGCCAC CAGTGCCGAC 
AAGGGTGCGG TGCGTAACAA GGCAATGCTG GAAGGCCTCT GA 

 

Protein sequence

MPDYRSKTST QGRNMAGARA LWRATGMKDE DFKKPIIAIA NSFTQFVPGH VHLKDLGQLV 
AREIERAGGV AKEFNTIAVD DGIAMGHDGM LYSLPSREII ADAVEYMVNA HCADAIVCIS 
NCDKITPGML MAALRLNIPV IFVSGGPMEA GKTKLASHGL DLVDAMVIAA DSTASDEKVA 
EYERSACPTC GSCSGMFTAN SMNCLTEALG LALPGNGSTL ATHSDREQLF LTAGRTIVEL 
CKRYYGENDE SVLPRSIANF KAFENAMMLD IAMGGSTNTI LHLLAAAQEG EVAFDLRDID 
RLSRKVPQLC KVAPNIQKYH MEDVHRAGGI FSILGSLARG GLLHTDLPTV HSRSMEEAIA 
KWDITQTDDE AVHTFFKAGP AGIPTQTAFS QSTRWETLDD DRENGCIRSF EHAYSQEGGL 
AVLYGNIALD GCVVKTAGVD ESIHVFEGTA KIFESQDSAV RGILADEVKA GDIVIIRYEG 
PKGGPGMQEM LYPTSYLKSK GLGKACALLT DGRFSGGTSG LSIGHASPEA AAGGAIGLVR 
DGDKVLIDIP NRSINLLVSD EELAQRRVEQ DKKGWKPAEV RPRKVTTALK AYALLATSAD 
KGAVRNKAML EGL