| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5100 |
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| Symbol | |
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| ID | 1042681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 5822463 |
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| End bp | 5823059 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637148499 |
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| Product | putative deoxyribonucleotide triphosphate pyrophosphatase |
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| Protein accession | NP_747201 |
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| Protein GI | 26991776 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0127] Xanthosine triphosphate pyrophosphatase |
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| TIGRFAM ID | [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.265609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGAATT TCCAGCAACT CGTATTGGCC AGCCACAATG CCGGCAAACT GAAGGAACTC
CAGGCCATGC TCGGCCATTC CGTGCAGCTG CACTCGATTG GTGAGTTCAG CCAGGTGGAG
CCGGAAGAAA CCGGCCTGTC GTTTGTCGAG AACGCCATCC TCAAGGCGCG CAACGCCGCC
CGCATTTCCG GCCTGCCGGC CTTGGCCGAT GACTCTGGAC TGGCGGTGGA CTTCCTCGGT
GGCGCGCCGG GCATCTACTC GGCGCGCTAT GCCGATGGCA AAGGTGACGC GGCAAACAAC
GCCAAGCTGC TCGAAGCCTT GAAAGACGTG CCTGAAGCTG AGCGCAGTGC ACAGTTCGTC
TGCGTTCTGG CGCTGGTGCG CCACGCCGAC GACCCGTTGC CGATCCTGTG CGAAGGCCTG
TGGCACGGGC GCATCCTGTT CGAGGCCAGC GGCGACCAGG GCTTTGGCTA CGATCCGCTG
TTCTGGGTAC CGGAGCGCAA CTGCTCCAGC GCCGATCTAG CCCCAGCAGA CAAGAACCAG
CTCAGCCACC GCGCCCGTGC CATGGCCCTG CTGCGCAAAC GTCTGGGCCT GGCATGA
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| Protein sequence | MMNFQQLVLA SHNAGKLKEL QAMLGHSVQL HSIGEFSQVE PEETGLSFVE NAILKARNAA
RISGLPALAD DSGLAVDFLG GAPGIYSARY ADGKGDAANN AKLLEALKDV PEAERSAQFV
CVLALVRHAD DPLPILCEGL WHGRILFEAS GDQGFGYDPL FWVPERNCSS ADLAPADKNQ
LSHRARAMAL LRKRLGLA
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