| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5093 |
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| Symbol | pilT |
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| ID | 1042013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5816934 |
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| End bp | 5817944 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637148492 |
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| Product | twitching motility protein |
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| Protein accession | NP_747194 |
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| Protein GI | 26991769 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGGAGTC TTATGGATGT GACCGACCTG TTGGCCCGAG CTGTGGATGC GGGGGCTTCA
GACCTGCACC TGGCGACGGG CCAGATTCCG ATGCTGCGCC TGGATGGCGA GTTGCAGCGT
ATGGGCTTGC CGCCGTTGAG CCAGGGTGCC TTGATCGAGG GCATGGCCAG CGTGCTGGAT
AACGATCAGC GCCGGCAGTG GGCCCAAGGC GATGAAATGG ACCTTGCGCT GGAGTTGCCG
GCGCTTGGGC GCTTTCGGCT GAACCTGTTT CGCCAGTTGA ATGGCCCGGC GGTTACCTTT
CGGCTGATCC CGGGGCGCAT TGCGACGGTG AGTGAGCTGG ACCTTGCGGA TGTGTTTCAA
GCTGTTGCGC ATTGCCGGGA TGGCTTGATC CTCGTGGGCG GGCCGACCGG CAGTGGCAAG
TCCAGCACCC TGGCAACGCT GCTCGACCAG CTGAACCGCG AGCGGGCGCT GCACATCATT
ACCCTGGAAG ACCCTGTCGA GATCATCCAT GACAGCCAGC GCAGCCTGGT CAACCAGCGT
GAGATGGGGC GCCATAGTCG CGGCTTTGCT CAGGGGCTGC GCAGTGCGCT GCGCCAGGAC
CCGGACGTGA TCATGATCGG CGAGTTGCGC GACCTGGAAA CCATTCGCCT GGCCCTGCGC
GCGGCCGAAA CCGGGCACCT GGTGCTGGCA ACCGTGCATG CGCGTTCGGC GACCAGCAGC
ATCGACAGGT TGGTGGAGGT GTTTGCTGCC GAGGAAAAGC CGTTGGTGCG GGCGATGCTG
GCCGAGTCGC TGCGCCTGGT GGTCGCGCAG GTGCTGGTCA GGCGCGTAGG GGGTGGGCGG
GTGGCGGCGC GGGAAGTGCT GGTGGCGACG CCGGCGGTGC GTAACCTGGT TCGGGAGGGG
CGGTTGGCGC AGTTGTCTTC AGTGATGCAG GGCGGGGCGG CGGAGGGGAT GCTGACGATG
GAGGGGGCGT TGCGGAGGCT GAGGGAGCGA GGGTTGATCA AAGGCTTGTA G
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| Protein sequence | MGSLMDVTDL LARAVDAGAS DLHLATGQIP MLRLDGELQR MGLPPLSQGA LIEGMASVLD
NDQRRQWAQG DEMDLALELP ALGRFRLNLF RQLNGPAVTF RLIPGRIATV SELDLADVFQ
AVAHCRDGLI LVGGPTGSGK SSTLATLLDQ LNRERALHII TLEDPVEIIH DSQRSLVNQR
EMGRHSRGFA QGLRSALRQD PDVIMIGELR DLETIRLALR AAETGHLVLA TVHARSATSS
IDRLVEVFAA EEKPLVRAML AESLRLVVAQ VLVRRVGGGR VAAREVLVAT PAVRNLVREG
RLAQLSSVMQ GGAAEGMLTM EGALRRLRER GLIKGL
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