| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5084 |
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| Symbol | |
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| ID | 1045110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 5805403 |
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| End bp | 5807856 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637148483 |
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| Product | penicillin-binding protein, 1A family |
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| Protein accession | NP_747185 |
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| Protein GI | 26991760 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.846696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATACGTC TGCTGAAGTT CTTCTGGTGG TCTTCCGTCG CAGTCATCTG CGCGCTCGTA
CTCGGTGTGA GCGGTGCGTT TCTGTATCTT AGTCCCAGCC TGCCCTCGGT CGAGTCCCTC
AGAAGCATCC AGTTGCAGAT CCCCCTCAGG GTGTACAGCA GCGATGGCAA GCTGATTGCC
GAATTCGGCG AAATGCGCCG CTCGCCGATC CGCTTCGCGG AAATTCCCCC ACAATTCATT
CAGGCGCTGC TGTCAGCCGA GGACGACAAT TTCCTCAACC ACTACGGCGT CGACCCCAGC
AGCCTGATGC GCGCAGCAAC CCAGCTGGTG AAAACCGGTC ATATCCAGAC CGGCGGCAGC
ACCATCACCA TGCAGGTGGC GAAGAACTTC TTCCTCACCA GCGAGCGCAG CTTCTCACGC
AAGACCAACG AAATCCTGCT GGCCCTGCAA ATCGAGCGTG AGCTGACCAA GGACGAAATC
CTTGAGCTGT ACGTGAACAA GATCTACCTG GGCAACCGCG CCTACGGTAT CGATGCAGCA
GCACAGGTGT ATTACGGCAA GTCCATCCGT GACGTGAGCC TGGCGCAGAT GGCGATGATC
GCCGGCCTGC CCAAGGCACC GTCGCGCTTC AACCCGCTGG CCAACCCGGT GCGCGCCAAA
GAGCGCCGCG ACTGGATCCT CGGGCGCATG TACAAGCTGG GCAAGATCGA CCAGGCCAGC
TACGAGGCCG CCCTGGCCGA GCCGCTCAAC GCCAGCTATC ACGTGCCGAC GCCTGAGGTG
AATGCCCCCT ACATCGCCGA AATGGCCCGC GCGGAAATGG TCGGCCGTTA CGGCAGCGAC
GCCTACACCG AAGGCTTCCG CGTCACGACC ACCGTGCCTA GCGACATGCA GGAAATGGCC
AACAAGGCCG TCCTCAAGGG CCTCTCCGAT TACGATGAGC GCCACGGCTA CCGTGGCCCT
GAAGCACGCT TCCCGGGCCG CACCCAGGCA GCGTGGCTGC AGGAGCTGGG CAAGCAACGC
ACCCTTGGCG GCCTGGAGCC AGCCATTGTC ACCCAGGTGG AACACACCGG CCTCAAGGTG
CTGACCCGTG ACGGCCAAGA GGCGCAGGTT GCCTGGGACA CCATGAAATG GGCGCGCCCG
TTCATCAACA ACAACGCCCA GGGCCGTTCA CCGCAATCAC CGGCCGACGT GGCCCAGGTC
GGTGACCTGG TGCGCCTGCA ACGCCTTGAC GATGGCACAT TGAAGTTCAG TCAGGTGCCC
GTTGCGCAGA GTGCCCTGGT CACCCTCGAC CCGAACAACG GCGCCATCCG CGCCCTGGTC
GGCGGTTTCT CGTTCGAACA GAGCAACTAC AACCGCGCCG TGCAGGCCAA GCGCCAACCG
GGCTCGAGTT TCAAACCCTT CATCTACAGC GCCGCGCTGG ACAGCGGCTA CACCGCTTCC
AGCCTGGTCA ACGATGCGCC GATCGTGTTC GTTGACGAGT CGGTGGACAA AGTGTGGCGA
CCGAAGAACG ATACCAACAC CTTCCTCGGC CCTATCCGCA TGCGTGAGGC GCTGTACAAG
TCACGTAACC TGGTGTCGAT CCGCCTGCTG CAAGCCATGG GCGTGGACCG CACCATCGAC
TACATCGCCA AGTTCGGCTT CAACAAGCAG GACCTGCCGC GCAACCTGTC GCTGGCCCTG
GGCACCGCCA CCCTGACCCC GATGGAAATC GCCACCGGCT GGAGCACCTT TGCCAACGGT
GGGTACAAGA TCACCCCGTA CCTGATCGAG CGCATCGAGA GCCGCAGCGG CGAGACACTG
TTCACCGCCA ACCCGGCCCG CGTACCGCAA GGTGCCCAAG ACCAGGCGGG CCTGGCCGCC
CCCGAGCAGC CAATCAGCAC TGCGGCCATG CCAGGCGAGG CACCTTCTGC CTTCAGTCAG
GTGGCCGCGG CATCGCAAGC GCCGGCAGTG GCCGAACAGA TCATCGACGG GCGTACCACC
TACATCCTCA CCAGCATGCT GCAGGACGTG ATCAAGCGCG GCACCGGCCG CCGGGCGCTG
GCCTTGGGCC GCACCGACCT GGCGGGCAAG ACGGGTACGA CCAACGAATC CAAGGACGCC
TGGTTCTCCG GTTACAACGC CGATTACGTG ACTACCGTTT GGGTCGGCTT CGACCAACCG
GAAACCCTCG GCCGCCGCGA ATATGGCGGG ACTGCGGCAC TGCCGATCTG GATGAACTTC
ATGGGCGCGG CGCTCAAGGA CAAGCCTGCG CATGCCCCGG CAGAACCGGA GGGCATTCTC
AGCTTGCGCG TCGACCCGGT CAGCGGGCGC GCGGCATCGC CGAGCACACC GAATGCCTAC
TTCGAGCTGT TCAAAGCCGA AGATTCTCCG CCGTCGGTGG ACGAACTGGG CAATGGCGCG
GCACCGGGCA GCCCGCTGCC AGCCGATGAA GCGACGCCGA TGGATCTGTT CTAA
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| Protein sequence | MIRLLKFFWW SSVAVICALV LGVSGAFLYL SPSLPSVESL RSIQLQIPLR VYSSDGKLIA
EFGEMRRSPI RFAEIPPQFI QALLSAEDDN FLNHYGVDPS SLMRAATQLV KTGHIQTGGS
TITMQVAKNF FLTSERSFSR KTNEILLALQ IERELTKDEI LELYVNKIYL GNRAYGIDAA
AQVYYGKSIR DVSLAQMAMI AGLPKAPSRF NPLANPVRAK ERRDWILGRM YKLGKIDQAS
YEAALAEPLN ASYHVPTPEV NAPYIAEMAR AEMVGRYGSD AYTEGFRVTT TVPSDMQEMA
NKAVLKGLSD YDERHGYRGP EARFPGRTQA AWLQELGKQR TLGGLEPAIV TQVEHTGLKV
LTRDGQEAQV AWDTMKWARP FINNNAQGRS PQSPADVAQV GDLVRLQRLD DGTLKFSQVP
VAQSALVTLD PNNGAIRALV GGFSFEQSNY NRAVQAKRQP GSSFKPFIYS AALDSGYTAS
SLVNDAPIVF VDESVDKVWR PKNDTNTFLG PIRMREALYK SRNLVSIRLL QAMGVDRTID
YIAKFGFNKQ DLPRNLSLAL GTATLTPMEI ATGWSTFANG GYKITPYLIE RIESRSGETL
FTANPARVPQ GAQDQAGLAA PEQPISTAAM PGEAPSAFSQ VAAASQAPAV AEQIIDGRTT
YILTSMLQDV IKRGTGRRAL ALGRTDLAGK TGTTNESKDA WFSGYNADYV TTVWVGFDQP
ETLGRREYGG TAALPIWMNF MGAALKDKPA HAPAEPEGIL SLRVDPVSGR AASPSTPNAY
FELFKAEDSP PSVDELGNGA APGSPLPADE ATPMDLF
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