| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5082 |
|---|
| Symbol | pilN |
|---|
| ID | 1041801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 5803785 |
|---|
| End bp | 5804321 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637148481 |
|---|
| Product | fimbrial assembly family protein |
|---|
| Protein accession | NP_747183 |
|---|
| Protein GI | 26991758 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3166] Tfp pilus assembly protein PilN |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGGC TGAACCTTCT GCCCTGGCGC GAACGGCAGC GTCAGGCGGC GCTGCGGCGC
TTTCGAGGCC AGTTGATTGC TGGCGCACTC CTGGCTTTGT GCGCCGTGAT GCTGGTCGAT
CAGCTGGCCC GCCAACGCGG GCAGCAGCAG GTGCTGGCCA ATACCCAGCG CCAAGCGACC
CTTGATATAC AGGATGAGCA GTTGCAGCCG CTGGCCGAAG TGCGTGCACA GCATGAAGCG
CTACTTGCCC GTGCGGTGGC CCTGGAGGGC CTGCGCGCCC ATCAGGGTGT ATTGGCCGGT
GTCTTCGCCG ACCTTGAAGG GGCGTTGCCT GAAGGTGTGC AGCTAATCGG CCTGAGCCTT
GATAGTGGCC GCTTGCAGGT GACAGGGTTG GCTGCGTCCG GTGCAGTGGT GGCGCAGTTC
ATGCGCGACT TGAACCGCTC GAACGTTTTG CTCGATCTGG AGCTCAAGCG CATCAAGAGC
CTGCCGGACG GCGATGAGTT TCTGCTCACC GCTCGTGTTG CGGCGTTCTG GTCGTGA
|
|---|
| Protein sequence | MMRLNLLPWR ERQRQAALRR FRGQLIAGAL LALCAVMLVD QLARQRGQQQ VLANTQRQAT
LDIQDEQLQP LAEVRAQHEA LLARAVALEG LRAHQGVLAG VFADLEGALP EGVQLIGLSL
DSGRLQVTGL AASGAVVAQF MRDLNRSNVL LDLELKRIKS LPDGDEFLLT ARVAAFWS
|
|---|
| |