| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5071 |
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| Symbol | |
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| ID | 1041805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5787860 |
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| End bp | 5788759 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637148470 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | NP_747172 |
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| Protein GI | 26991747 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.112048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTGC GTCATCTGCG TTACTTCATT GCTGTGGCCG AAGAGCTGCA CTTTGGCCGC
GCCGCCCAGC AGCTGGGTAT TTCCCAACCG CCCTTGAGTC AGCAGATCCA GGCTCTGGAG
CAGGAGTTGG GGGCCCGGTT GTTCGACCGT ACCAATCGTC GTGTCGAACT GAGCGAGGCC
GGGCGATTGT TCCTCGAGGA AGCGCGCCAG GTATTGGCGC AGGTGGAGAA GGCCGCGGAT
GTCGCCCGGC GTGCGCAGTT GGGCGAGCTG GGGGAGATGA AAATCGGTTT CACCTCCTCG
GCCCCGTTCA CCTCGAAAAT CCCCAAGGCC ATTCACGCCT TCCGTCAGCG CTTTCCGGCG
GTGCACCTGA ACCTCAAGGA AATGAGCAGC CGTGATGTTG CCGAAGGGGT ATTCGACGAG
TCCATCGAGG TGGGGTTGAT GCGGCCGATG CCGCTGCCGG AGGGGTTGGT GGCCACCGAG
TTGTTCCGAG AACCGTTGGT GGCGGTGATC AATGCTTCGC ATCCGCTGGC TGAGGGCACT
GAGCAAGGCG TCTACATGGC GGCGTTGGCC CCTGAGCCCT TCGTGTTCTT CCCGCGCAGT
TATGGCAGCG GCTTGCATGC ACAATTGCTG AGCCTGGCAC GGCATGCGGG TTTCAGCCCC
CATTTTGCGC AAGAGGCAGG GGAAGCGATG ACCATCATCG GCCTGGTCTC GGCGGGGCTG
GGGGTGTCGG TGTTGCCGGC GTCGTTCCAG CGCATGCGCA TCGAAGGGGT GGTGTACCGC
ACCTTGCTCG ATGAAGAGGC GATGACGGCG GTGTGGCTGG TGCAGCGCGA GCGTGGTCAT
TCGGTCATGG CCAAGGCATT TGCCGAGTTG TTGACAGGGC AGGTGGTCGG TCAGGCGTGA
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| Protein sequence | MELRHLRYFI AVAEELHFGR AAQQLGISQP PLSQQIQALE QELGARLFDR TNRRVELSEA
GRLFLEEARQ VLAQVEKAAD VARRAQLGEL GEMKIGFTSS APFTSKIPKA IHAFRQRFPA
VHLNLKEMSS RDVAEGVFDE SIEVGLMRPM PLPEGLVATE LFREPLVAVI NASHPLAEGT
EQGVYMAALA PEPFVFFPRS YGSGLHAQLL SLARHAGFSP HFAQEAGEAM TIIGLVSAGL
GVSVLPASFQ RMRIEGVVYR TLLDEEAMTA VWLVQRERGH SVMAKAFAEL LTGQVVGQA
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