Gene PP_5057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5057 
Symbol 
ID1043401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5762616 
End bp5763932 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content62% 
IMG OID637148456 
ProductM24/M37 family peptidase 
Protein accessionNP_747158 
Protein GI26991733 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG4942] Membrane-bound metallopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCGCG CCCTGATCCT CCTAGCCCTG TCTTGCCTGC TCAGCCCGGC CTTCGCCGAT 
GAGCGTGCGC AGACCCAGCA GCAACTGGAT GCCACCCGCC AGGACATTGC CGAGCTCAAG
AAAACGCTGA GCAAGCTCCA GGAAGAAAAG GCCGGTGTGC AAAAAGACCT CAAAGCCACC
GAAACCGACA TCGGCAACCT CGAAAAGCAG GTGGAGGCCC TGCAGCAAGA ACTAAAAAAG
ACTGAAGGCG AGCTGGAGCG CCTTGATACC GAGAAAAAAA AACTCCAGAG CGCCCGCGTT
GAACAACAAC GACTGATCGC CATTCAGGCC CGTTCGGCCT ACCAGAACAA TGGTCGCGAG
GAATACCTCA AGCTGCTGCT CAACCAGCAG AACCCCGAGA AATTCGCCCG CACCCTCACC
TATTACGACT ACCTGAGCAA GGCGCGCCTG GAGCAATTGC GCACCTTCAA CGAGACCTTG
CGCCAACTGG CCAACGTCGA ACAGGAAATT TCCAGCCAGC AACAACAACA GCTGGCCCAG
CGCACCGACC TCGACAGCCG CCGCCAGGCC CTGGAAACCG AGCGCGCCAA GCGCCAGCAG
GTACTGGCAA AGCTCAACAG CGATGTGAAG GACCGCGATC AGAAGCTGCA AGCGCGCGAA
CAGGACCAGG CCGACCTGGC CAAGGTCTTG AAGACCATCG AGGAAACCCT CGCCCGCCAG
GCCCGTGAAG CTGAAGAGGC ACGCAAGAAG GCCCTGCTGG CGCAGCAGGA AGCGGAAAAA
CGCCGCCAGC AGGAAGCGCT GGCCGCCGCC GCTGCCCGCG ACCGGGCCCG TGAGCCTGCA
GAGCCAGTGG AACCGCCGAA AAAGGCCCGT ACCACCCTCG GGCCGATGGT TTCCAGCGAT
GGCGCCAACT ACGGCGGCGC ATTTTCTGCT GCGCGGGGCA AACTTCCATG GCCAGTCAAT
GGTCGATTGC TGGCACGTTT CGGTGATGCC CGCGGTAGCG ACGCCCGTGC CAAGTGGGAC
GGGGTTATGA TCAGCGCCAA CCCAGGCACC CAGGTACGTG CCGTGCACGG CGGGCGTGTG
GTATTCGCGG ACTGGTTGCG CGGTGCCGGG CTTCTGGTCA TTCTCGACCA TGGCAACGGT
TACCTGAGCC TGTACGGCCA CAACCAGAGC CTGCTCAAGA ATGCCGGTGA TATCGTCAAG
GCCGGTGAAG CCATTTCCAC CGTTGGCGAC AGCGGTGGTC AGGACGCGGC AGGCTTGTAT
TTCGCTATCC GCCAGCAGGG CCGGCCTACC GACCCTTCGC AGTGGTGCCG GGGCTAG
 
Protein sequence
MLRALILLAL SCLLSPAFAD ERAQTQQQLD ATRQDIAELK KTLSKLQEEK AGVQKDLKAT 
ETDIGNLEKQ VEALQQELKK TEGELERLDT EKKKLQSARV EQQRLIAIQA RSAYQNNGRE
EYLKLLLNQQ NPEKFARTLT YYDYLSKARL EQLRTFNETL RQLANVEQEI SSQQQQQLAQ
RTDLDSRRQA LETERAKRQQ VLAKLNSDVK DRDQKLQARE QDQADLAKVL KTIEETLARQ
AREAEEARKK ALLAQQEAEK RRQQEALAAA AARDRAREPA EPVEPPKKAR TTLGPMVSSD
GANYGGAFSA ARGKLPWPVN GRLLARFGDA RGSDARAKWD GVMISANPGT QVRAVHGGRV
VFADWLRGAG LLVILDHGNG YLSLYGHNQS LLKNAGDIVK AGEAISTVGD SGGQDAAGLY
FAIRQQGRPT DPSQWCRG