| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5053 |
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| Symbol | secB |
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| ID | 1042615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5759538 |
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| End bp | 5760023 |
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| Gene Length | 486 bp |
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| Protein Length | 161 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637148452 |
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| Product | preprotein translocase subunit SecB |
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| Protein accession | NP_747154 |
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| Protein GI | 26991729 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1952] Preprotein translocase subunit SecB |
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| TIGRFAM ID | [TIGR00809] protein-export chaperone SecB |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.112175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGACC AACAGACCAA CGGCGCTGCT GCAGAAGACA ACAGCCCTCA GTTCTCCCTG
CAACGCATCT ATGTGCGTGA CCTGTCGTTC GAGGCCCCGA AAAGCCCGCA GATCTTCCGT
CAGACCTGGG AACCGAGCGT TGCCCTGGAC CTGAACACCA AGCAGAAATC CCTGGAAGGT
GACTTCCACG AGGTCGTGCT GACCCTGTCG GTTACCGTCA AGAACGGTGA CGAAGTGGCC
TTCATTGCTG AAGTGCAGCA GGCCGGTATC TTCCTGATCG CCAACCTCGA TGCGCCTTCG
ATGAGCCACA CCCTGGGTGC GTTCTGCCCG AACATCCTGT TCCCTTATGC CCGTGAGGCC
CTGGACAGCC TGGTGACCCG CGGTTCGTTC CCGGCGCTGA TGCTGTCGCC GGTCAACTTC
GACGCCCTGT ACGCGCAAGA AATGCAGCGT ATGCAGGAAG CGGGTGAAGC GCCTACTGTG
CAGTAA
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| Protein sequence | MTDQQTNGAA AEDNSPQFSL QRIYVRDLSF EAPKSPQIFR QTWEPSVALD LNTKQKSLEG
DFHEVVLTLS VTVKNGDEVA FIAEVQQAGI FLIANLDAPS MSHTLGAFCP NILFPYAREA
LDSLVTRGSF PALMLSPVNF DALYAQEMQR MQEAGEAPTV Q
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