| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5031 |
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| Symbol | |
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| ID | 1044217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5732562 |
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| End bp | 5733965 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637148430 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | NP_747132 |
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| Protein GI | 26991707 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.912254 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACAAG CTCAAGGTCT CAAGCGCGGG CTAAGTGCCC GCCACATCCG TTTCATGGCC
CTCGGCTCCG CCATCGGCAC CGGCCTTTTC TACGGCTCTG CCTCGGCCAT CCAGATGGCA
GGCCCGGCCG TTCTGCTGGC CTACCTGATC GGCGGCGCTG CAGTGTTCAT GGTCATGCGC
GCCCTTGGCG AAATGGCCGT GCACAACCCG GTGGCCGGCT CCTTCGGCCA CTACGCCACC
ACCTACCTCG GCCCAATGGC CGGCTTCATC CTTGGCTGGA CCTACGCTTT CGAGATGGTC
ATCGTCGCCA TCGCCGACGT CACCGCGTTC GGTATCTACA TGGGCTTCTG GTTCCCGGAG
GTAGCCCGCT GGATCTGGGT GCTGGGCATC GTTTTCCTGA TCGGCGGCCT CAACCTATGC
AACGTCAAGG TATTCGGCGA AATGGAATTC TGGCTGTCGC TGCTCAAGGT CGGCGCCATC
GTGGCGATGA TCCTGGCCGG CCTCGGCATC ATGGCTTTCG GTTTCAGCCA GGTGGGTACC
GGGCATGCCG TGGGCATGAG CAACCTGTTC GACCACGGCG GCTTCATGCC TAACGGCGTG
GGGGGCTTGA TTGCGTCGTT TGCCGTGGTG ATGTTCGCCT TCGGCGGTAT CGAGATCATC
GGCGTCACCG CCGGCGAGGC AAAAGACCCG CAGCGCGTCA TTCCCAAAGC GATCAACGCG
GTGCCACTGC GTATCCTGCT GTTCTACGTG CTCACCCTGT TCGTGCTGAT GTGCCTGTAC
CCATGGCCGC AGATCGGCAG CCAGGGCAGC CCGTTCGTGC AGATCTTCAG CAACCTGGGC
ATTGGCTCTG CCGCTGCCGT GCTGAACGTC GTGGTGATTT CCGCTGCCAT CTCCGCCATC
AACAGCGACA TCTTTGGCGC TGGCCGCATG ATGTATGGCC TGGCCCAGCA AGGCCACGCC
CCGCGCGGTT TCAGCAAGTT GTCGAAACAT GGCGTACCGT GGATGACCGT CGTGGTGATG
GGGGCTGCGC TGCTGATCGG CGTATTGCTC AACTACCTGA TCCCGGAAAA TGTGTTCCTG
CTGATTGCCT CGATCGCCAC CTTCGCCACG GTGTGGGTGT GGCTGATGAT CCTGCTCACC
CAGGTAGCCA TGCGCCGCAG CATGAGCCGC GAGCAAGTGG CCCAGCTCAA GTTTCCGGTA
CCGTTCTGGC CATACGGCCC GGCCATGGCC ATTGCGTTCA TGGTGTTCAT CTTTGGCGTG
CTCGGTTACT TCCCGGACAC CCAGGCGGCA TTGATCGTCG GCGTGATCTG GGTGGTATTC
CTGGTGGCGT CCTACCTGCT GTGGTGCAAG CCGCGCGCAG GGCAGGGCCA GCCGGTAGCG
GAGCCGGCCG AGCTGCACCG CTAG
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| Protein sequence | MQQAQGLKRG LSARHIRFMA LGSAIGTGLF YGSASAIQMA GPAVLLAYLI GGAAVFMVMR
ALGEMAVHNP VAGSFGHYAT TYLGPMAGFI LGWTYAFEMV IVAIADVTAF GIYMGFWFPE
VARWIWVLGI VFLIGGLNLC NVKVFGEMEF WLSLLKVGAI VAMILAGLGI MAFGFSQVGT
GHAVGMSNLF DHGGFMPNGV GGLIASFAVV MFAFGGIEII GVTAGEAKDP QRVIPKAINA
VPLRILLFYV LTLFVLMCLY PWPQIGSQGS PFVQIFSNLG IGSAAAVLNV VVISAAISAI
NSDIFGAGRM MYGLAQQGHA PRGFSKLSKH GVPWMTVVVM GAALLIGVLL NYLIPENVFL
LIASIATFAT VWVWLMILLT QVAMRRSMSR EQVAQLKFPV PFWPYGPAMA IAFMVFIFGV
LGYFPDTQAA LIVGVIWVVF LVASYLLWCK PRAGQGQPVA EPAELHR
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