| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_5022 |
|---|
| Symbol | |
|---|
| ID | 1045246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 5721520 |
|---|
| End bp | 5722254 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637148421 |
|---|
| Product | amino acid ABC transporter ATP-binding protein |
|---|
| Protein accession | NP_747123 |
|---|
| Protein GI | 26991698 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.670825 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATTGAAG TCCGTGACCT GCTGAAAGTC TTCGACACCC GTGGCCAGGT GGTAAGGGCT
GTGGATAACG TCACCACTCA GGTCGCCAAG GGCGAAGTGG TGGTCGTGCT CGGCCCGTCG
GGGTCGGGCA AGTCGACATT CCTGCGCTGC CTCAACGGCC TGGAGCATTT CGACCAAGGC
CATGTGGCCA TCGACGGCTT GCAACTGGCC GACCCCAAGA CCGACATCAA TGCCTACCGC
CGCGAAGTCG GCATGGTGTT CCAGCACTTC AACCTGTTTC CGCACATGAC TGTGCTGGAA
AACCTGTGCC TGGCGCAGAA GGTGGTGCGC AAGCGCAACA AGGCTGACCG CGAAGCCAAG
GCCCGGGCGT TGCTGGAGAA GGTGGGTATT TCGCAGAAGG CCAACGAGTA CCCGTCGCGC
TTGTCTGGCG GCCAGCAACA GCGGGTGGCG ATTGCCCGGG CCCTGGCGAT GGACCCGAAA
GTGATGCTGT TCGACGAGCC GACCTCGGCG CTCGACCCGG AAATGGTCGG TGAGGTGCTG
GACGTGATGA AGACCCTGGC CCAGGAAGGC ATGACCATGG TCTGCGTCAC CCATGAAATG
GGCTTTGCCC GCGAAGTGGC TGACCGCGTG CTGTTCTTCG ACCATGGCAA GCTGCTGGAA
GATTCGGCCC CGGCCGCATT CTTCGCTGCG CCGAAAGACC CGCGTGCGCA GGCATTCCTG
CGCCAGGTGC TGTAA
|
|---|
| Protein sequence | MIEVRDLLKV FDTRGQVVRA VDNVTTQVAK GEVVVVLGPS GSGKSTFLRC LNGLEHFDQG
HVAIDGLQLA DPKTDINAYR REVGMVFQHF NLFPHMTVLE NLCLAQKVVR KRNKADREAK
ARALLEKVGI SQKANEYPSR LSGGQQQRVA IARALAMDPK VMLFDEPTSA LDPEMVGEVL
DVMKTLAQEG MTMVCVTHEM GFAREVADRV LFFDHGKLLE DSAPAAFFAA PKDPRAQAFL
RQVL
|
|---|
| |