Gene PP_5007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_5007 
Symbol 
ID1044159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5704578 
End bp5705363 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content63% 
IMG OID637148407 
Productpoly(hydroxyalkanoate) granule-associated protein 
Protein accessionNP_747109 
Protein GI26991684 
COG category[S] Function unknown 
COG ID[COG3937] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01837] poly(hydroxyalkanoate) granule-associated protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.508327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGCA AGAAGAACAC CGAAAAAGAA GGCAGCTCCT GGGTCGGCGG GATCGAGAAA 
TACTCCCGCA AGATCTGGCT GGCGGGGCTG GGTATCTATT CGAAGATCGA CCAGGACGGC
CCGAAGCTGT TCGACTCGCT GGTGAAGGAT GGCGAGAAGG CCGAGAAGCA GGCGAAAAAG
ACGGCTGAAG ATGTTGCCGA GACTGCCAAG TCTTCGACCA CTTCGCGGGT GTCGGGCGTG
AAGGACCGTG CGCTGGGCAA GTGGAGCGAA CTTGAAGAAG CCTTCGACAA GCGCCTTAAC
AGCGCCATCT CGCGCCTTGG CGTGCCGAGC CGCAACGAGA TCAAGGCACT GCACCAGCAG
GTGGACAGCC TGACCAAGCA GATCGAGAAG CTGACCGGTG CTTCGGTTAC GCCGATTTCG
TCGCGCGCTG CAGCAACCAA GCCGGCTGCA AGCAAGGCTG CGGCCAAGCC ACTGGCCAAG
GCAGCAGCTA AGCCTGCGGC GAAAACGGCG GCGGCCAAAC CTGCTGGCAA AACCGCAGCG
GCCAAACCCG CAGCCAAAAC CGCAGCGGAA AAACCTGCAG CTAAGCCAGC AGCCAAGCCT
GCAGCGGCCA AACCTGCGGC AGCCAAGAAA CCTGCGGTGA AGAAAGCTCC AGCCAAACCG
GCAGCGGCCA AACCAGCAGC ACCAGCTGCC AGCGCTGCGC CTGCAGCGAC CACAGCACCG
GCAACTGCCG CCACCCCGGC CAGCAGCACG CCGTCGGCAC CGACTGGCAC CGGTACCCTG
ATCTGA
 
Protein sequence
MAGKKNTEKE GSSWVGGIEK YSRKIWLAGL GIYSKIDQDG PKLFDSLVKD GEKAEKQAKK 
TAEDVAETAK SSTTSRVSGV KDRALGKWSE LEEAFDKRLN SAISRLGVPS RNEIKALHQQ
VDSLTKQIEK LTGASVTPIS SRAAATKPAA SKAAAKPLAK AAAKPAAKTA AAKPAGKTAA
AKPAAKTAAE KPAAKPAAKP AAAKPAAAKK PAVKKAPAKP AAAKPAAPAA SAAPAATTAP
ATAATPASST PSAPTGTGTL I